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sw_6_scaffold_556

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_556_1
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(105..1481)
DNA (1377bp) protein (459aa)
D-hydantoinase {ECO:0000313|EMBL:ADE01647.1}; EC=3.5.2.2 {ECO:0000313|EMBL:ADE01647.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source=
D-hydantoinase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQY1_HALVD
dht; D-hydantoinase
sw_6_scaffold_556_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1478..2716)
DNA (1239bp) protein (413aa)
amaB; allantoate amidohydrolase/N-carbamoyl-L-amino acid amidohydrolase (EC:3.5.1.6)
Allantoate amidohydrolase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JQ96_9EURY
Allantoate amidohydrolase {ECO:0000313|EMBL:EMA10533.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATC
sw_6_scaffold_556_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2805..4430
DNA (1626bp) protein (542aa)
N-acyl-D-glutamate deacylase (EC:3.5.1.82)
N-acyl-D-glutamate deacylase {ECO:0000313|EMBL:ADB62802.1}; EC=3.5.1.82 {ECO:0000313|EMBL:ADB62802.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloter
N-acyl-D-glutamate deacylase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0A5_HALTV
sw_6_scaffold_556_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4522..5685)
DNA (1164bp) protein (388aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococ
Threonine synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBR3_9EURY
threonine synthase
sw_6_scaffold_556_5
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(5850..6506)
DNA (657bp) protein (219aa)
Hypothetical conserved protein id=2051569 bin=GWB2_Chloroflexi_54_36 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein
sw_6_scaffold_556_6
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

6868..7755
DNA (888bp) protein (296aa)
hypothetical protein Tax=RBG_16_CPR_42_10_curated
Putative uncharacterized protein id=2051571 bin=GWB2_Chloroflexi_54_36 species=[Eubacterium] biforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
sw_6_scaffold_556_7
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

7752..8609
DNA (858bp) protein (286aa)
Cobalt/nickel ABC transporter ATP-binding protein id=2051573 bin=GWB2_Chloroflexi_54_36 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ABC transporter ATP-binding protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=GWB2_Chloroflexi_54_36_curated
cobalt/nickel ABC transporter ATP-binding protein
sw_6_scaffold_556_8
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

9040..9336
DNA (297bp) protein (99aa)
Cobalt/nickel ABC transporter ATP-binding protein id=2051575 bin=GWB2_Chloroflexi_54_36 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
CbiO; ABC-type cobalt transport system, ATPase component; K02006 cobalt/nickel transport system ATP-binding protein Tax=GWB2_Chloroflexi_54_36_curated
cobalt ABC transporter, ATP-binding protein
sw_6_scaffold_556_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9382..10080
DNA (699bp) protein (233aa)
Hydantoin racemase {ECO:0000313|EMBL:EEG53420.1}; EC=5.1.99.5 {ECO:0000313|EMBL:EEG53420.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostri
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002D8C1F8
Hydantoin racemase
sw_6_scaffold_556_10
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10069..10791)
DNA (723bp) protein (241aa)
Bat-like protein n=2 Tax=Haloarcula RepID=Q5UZM5_HALMA
boa-8; bacterio-opsin activator
Bat-like protein {ECO:0000313|EMBL:AAV47278.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC
sw_6_scaffold_556_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11122..11814
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBT6_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16739.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_556_12
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11801..12088
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LGJ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS92171.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_6_scaffold_556_13
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12210..12752
DNA (543bp) protein (181aa)
Transposase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YEV0_9EURY
Transposase {ECO:0000313|EMBL:ELY72067.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
IS240-type transposase
sw_6_scaffold_556_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12740..13063)
DNA (324bp) protein (108aa)
Site-specific recombinase XerC n=1 Tax=Natronococcus occultus SP4 RepID=L0JVX6_9EURY
site-specific recombinase XerC
Site-specific recombinase XerC {ECO:0000313|EMBL:AGB36911.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus S
sw_6_scaffold_556_15
unknown

Not on your lists

13251..13856
DNA (606bp) protein (202aa)

This feature has no annotations

sw_6_scaffold_556_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13884..16193
DNA (2310bp) protein (770aa)
DNA/RNA helicase, superfamily I n=2 Tax=Haloarcula hispanica RepID=G0HYH6_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF28067.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_6_scaffold_556_17
unknown

Not on your lists

16132..16398
DNA (267bp) protein (89aa)

This feature has no annotations

sw_6_scaffold_556_18
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16418..16744)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BBX9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ08330.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
D-tyrosyl-tRNA deacylase
sw_6_scaffold_556_19
unknown

Not on your lists

16906..17613
DNA (708bp) protein (236aa)

This feature has no annotations

sw_6_scaffold_556_20

Not on your lists

17831..19780
DNA (1950bp) protein (650aa)
Phospholipase D (Fragment) n=1 Tax=uncultured archaeon A07HR60 RepID=V4YK29_9ARCH
Phospholipase D {ECO:0000313|EMBL:ESS11807.1}; Flags: Fragment;; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
tyrosyl-DNA phosphodiesterase
sw_6_scaffold_556_21
unknown

Not on your lists

19852..20760
DNA (909bp) protein (303aa)

This feature has no annotations

sw_6_scaffold_556_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20790..21251)
DNA (462bp) protein (154aa)
NUDIX hydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTB1_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:EFW91840.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253
ADP-ribose pyrophosphatase
sw_6_scaffold_556_23
unknown

Not on your lists

comp(21217..21642)
DNA (426bp) protein (142aa)

This feature has no annotations

sw_6_scaffold_556_24
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21855..22508
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CZ60_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO59528.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_6_scaffold_556_25
unknown

Not on your lists

22666..23052
DNA (387bp) protein (129aa)

This feature has no annotations

sw_6_scaffold_556_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23049..23465)
DNA (417bp) protein (139aa)
LtrC-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3H8_9EURY
hypothetical protein
LtrC-like protein {ECO:0000313|EMBL:ELZ28709.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 148
sw_6_scaffold_556_27
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23902..24192
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZ65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40801.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
sw_6_scaffold_556_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24570..25358)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MA34_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42208.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
IclR family transcriptional regulator
sw_6_scaffold_556_29
unknown

Not on your lists

25595..26086
DNA (492bp) protein (164aa)

This feature has no annotations

sw_6_scaffold_556_30
unknown

Not on your lists

comp(26124..26768)
DNA (645bp) protein (215aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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