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sw_6_scaffold_567

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_567_1
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

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comp(706..1494)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0YK52_9CHLO
Uncharacterized protein {ECO:0000313|EMBL:EIE18771.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169
hypothetical protein
sw_6_scaffold_567_2
unknown

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2070..2687
DNA (618bp) protein (206aa)

This feature has no annotations

sw_6_scaffold_567_3
unknown

Not on your lists

3070..4092
DNA (1023bp) protein (341aa)

This feature has no annotations

sw_6_scaffold_567_4
unknown

Not on your lists

comp(3974..4585)
DNA (612bp) protein (204aa)

This feature has no annotations

sw_6_scaffold_567_5
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

4595..5221
DNA (627bp) protein (209aa)
Brix domain-containing protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00U65_OSTTA
Brix domain {ECO:0000313|EMBL:CEG00383.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ostreococcus
brix domain-containing protein (ISS); K14859 ribosome biogenesis protein SSF1/2
sw_6_scaffold_567_6
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(5275..6624)
DNA (1350bp) protein (450aa)
Amino Acid/Auxin permease family n=1 Tax=Bathycoccus prasinos RepID=K8EQ14_9CHLO
Amino acid auxin permease family {ECO:0000313|EMBL:JAC78131.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetraselmis.;" sour
AAAP family transporter: amino acid
sw_6_scaffold_567_7
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

6629..7750
DNA (1122bp) protein (374aa)
COG0465: ATP-dependent Zn proteases (ISS) (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q00YT8_OSTTA
P-loop containing nucleoside triphosphate hydrolase {ECO:0000313|EMBL:CEF99656.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccace
ATP-dependent metalloprotease FtsH
sw_6_scaffold_567_8
Lactobacillus kunkeei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7784..8305
DNA (522bp) protein (174aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=148814 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactoba
ftsH; cell division protease FtsH (EC:3.4.24.-)
cell division protein FtsH n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B54DD2
sw_6_scaffold_567_9
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

Not on your lists

8310..8984
DNA (675bp) protein (225aa)
Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4S4T7_OSTLU
Aaa-domain-containing protein {ECO:0000313|EMBL:JAC70422.1}; Flags: Fragment;; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetr
peptidase M41
sw_6_scaffold_567_10
unknown

Not on your lists

8965..9081
DNA (117bp) protein (39aa)

This feature has no annotations

sw_6_scaffold_567_11
unknown

Not on your lists

9156..10019
DNA (864bp) protein (288aa)

This feature has no annotations

sw_6_scaffold_567_12
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(10145..10639)
DNA (495bp) protein (165aa)
Eukaryotic translation initiation factor 6 n=1 Tax=Volvox carteri RepID=D8TQW4_VOLCA
Eukaryotic translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_03132}; Short=eIF-6 {ECO:0000256|HAMAP-Rule:MF_03132};; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae;
translation initiation factor aIF-6
sw_6_scaffold_567_13
unknown

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10663..10836
DNA (174bp) protein (58aa)

This feature has no annotations

sw_6_scaffold_567_14
unknown

Not on your lists

10833..11108
DNA (276bp) protein (92aa)

This feature has no annotations

sw_6_scaffold_567_15
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(11112..11930)
DNA (819bp) protein (273aa)
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1E361_MICSR
Photosystem II Psp29, biogenesis {ECO:0000313|EMBL:CEF97146.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;"
Thf1-like protein
sw_6_scaffold_567_16
unknown

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12761..13951
DNA (1191bp) protein (397aa)

This feature has no annotations

sw_6_scaffold_567_17
unknown

Not on your lists

14260..15132
DNA (873bp) protein (291aa)

This feature has no annotations

sw_6_scaffold_567_18
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(15351..16148)
DNA (798bp) protein (266aa)
Ribosome-recycling factor n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6B2_THEAQ
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=498848 species="Bacteria;
frr; ribosome recycling factor
sw_6_scaffold_567_19
unknown

Not on your lists

16307..16840
DNA (534bp) protein (178aa)

This feature has no annotations

sw_6_scaffold_567_20
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

16877..18091
DNA (1215bp) protein (405aa)
Cytosolic Fe-S cluster assembly factor NBP35 n=1 Tax=Zea mays RepID=B6TEA3_MAIZE
Cytosolic Fe-S cluster assembly factor NBP35 {ECO:0000256|HAMAP-Rule:MF_03038}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Lil
ParA/MinD-like ATPase
sw_6_scaffold_567_21
unknown

Not on your lists

comp(18056..18163)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_6_scaffold_567_22
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(18135..18398)
DNA (264bp) protein (88aa)
PREDICTED: phenylalanyl-tRNA synthetase beta chain isoform 3 n=1 Tax=Cricetulus griseus RepID=UPI00022F652F
Suspect SCG annotation. See neighboring gene [sw_6_scaffold_567_23].
Farsb; phenylalanyl-tRNA synthetase, beta subunit
Phenylalanyl-tRNA synthetase beta chain {ECO:0000313|EMBL:EGW13166.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glir
sw_6_scaffold_567_23
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

Not on your lists


comp(18554..19447)
DNA (894bp) protein (298aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SET8_PHYPA
Predicted protein {ECO:0000313|EMBL:EDQ70290.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physco
sw_6_scaffold_567_24
Xiphophorus maculatus, Xiphophorus, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(19667..20230)
DNA (564bp) protein (188aa)
Phenylalanyl-tRNA synthetase beta chain n=1 Tax=Salmo salar RepID=B5X0Z8_SALSA
Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000008319}; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleo
phenylalanine--tRNA ligase beta subunit-like
sw_6_scaffold_567_25
unknown

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comp(20291..20452)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_6_scaffold_567_26
unknown

Not on your lists

20652..20849
DNA (198bp) protein (66aa)

This feature has no annotations

sw_6_scaffold_567_27
unknown

Not on your lists

21107..21619
DNA (513bp) protein (171aa)

This feature has no annotations

sw_6_scaffold_567_28
unknown

Not on your lists

comp(21662..21805)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_6_scaffold_567_29
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(22104..23198)
DNA (1095bp) protein (365aa)
Endonuclease III homolog {ECO:0000256|HAMAP-Rule:MF_03183}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_03183};; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_03183};; Bifunctional DNA N-glycoslyase/DNA-(apurinic
exodeoxyribonuclease III Xth (EC:4.2.99.18)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3J007_STRPU
sw_6_scaffold_567_30
unknown

Not on your lists

comp(23192..23419)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 30 items

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