ggKbase home page

sw_6_scaffold_817

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_817_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..1291
DNA (1290bp) protein (430aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227487 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV94_9EURY
hypothetical protein
sw_6_scaffold_817_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1492..2001
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7B2_9EURY
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKF40106.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
sw_6_scaffold_817_3
unknown

Not on your lists

2398..2556
DNA (159bp) protein (53aa)

This feature has no annotations

sw_6_scaffold_817_4
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2674..3177
DNA (504bp) protein (168aa)
transposase n=1 Tax=Halomicrobium katesii RepID=UPI000374F76D
Transposase (ISH7) {ECO:0000313|EMBL:ELY94721.1}; Flags: Fragment;; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoen
hypothetical protein
sw_6_scaffold_817_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3204..4781
DNA (1578bp) protein (526aa)
Transposase ISH7 n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=B0R8U9_HALS3
transposase (ISH7) rbh
ISH7-type transposase ISH7 {ECO:0000313|EMBL:CAP15137.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinaru
sw_6_scaffold_817_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5084..6292
DNA (1209bp) protein (403aa)
Cell division protein FtsZ n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN79_NATM8
ftsZ1; cell division protein FtsZ, type I
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_6_scaffold_817_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6423..6596
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P127_HALMD
protein translocase SEC61 complex subunit gamma
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=485914 species="Archaea; Euryarchaeot
sw_6_scaffold_817_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6596..7033
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVY0_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
nusG; transcription antitermination protein NusG
sw_6_scaffold_817_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7594..8802
DNA (1209bp) protein (403aa)
Type III restriction protein res subunit n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQN6_HALUD
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ACV10495.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdu
sw_6_scaffold_817_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8802..10349
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP80_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25060.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_817_11
unknown

Not on your lists

comp(10346..10840)
DNA (495bp) protein (165aa)

This feature has no annotations

sw_6_scaffold_817_12
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10952..11464)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HK97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ84980.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_6_scaffold_817_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11461..12267)
DNA (807bp) protein (269aa)
Proliferating-cell nucleolar antigen protein {ECO:0000313|EMBL:ERJ07676.1}; EC=2.1.1.144 {ECO:0000313|EMBL:ERJ07676.1};; tRNA m5C48-49 methylase {ECO:0000313|EMBL:CCQ32667.1}; TaxID=1033806 species="A
RNA methylase, NOL1/NOP2/sun family protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P432_9EURY
RNA methylase, NOL1/NOP2/sun family
sw_6_scaffold_817_14
unknown

Not on your lists

comp(12332..12448)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 14 items

View Taxonomy