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sw_6_scaffold_876

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_876_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..346
DNA (345bp) protein (115aa)
Integrase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE90_9EURY
Integrase {ECO:0000313|EMBL:EMA56161.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
transposase
sw_6_scaffold_876_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(488..1141)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Halococcus hamelinensis RepID=UPI00029A7028
Uncharacterized protein {ECO:0000313|EMBL:EMA42095.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_876_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1122..2057)
DNA (936bp) protein (312aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGZ1_9EURY
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA55925.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
cbiO; ABC-type transport system ATP-binding protein (probable substrate cobalt/nickel/biotin)
sw_6_scaffold_876_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2054..2869)
DNA (816bp) protein (272aa)
Cobalt ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDJ5_9EURY
Cobalt ABC transporter permease {ECO:0000313|EMBL:EMA55926.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
cbiQ; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_6_scaffold_876_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2874..3215)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55927.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
ABC-type transport system small membrane protein (probable substrate cobalt/nickel/biotin)
sw_6_scaffold_876_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3215..3895)
DNA (681bp) protein (227aa)
Cobalt ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEE4_9EURY
Cobalt ABC transporter permease {ECO:0000313|EMBL:EMA55928.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_6_scaffold_876_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4157..4309
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JW79_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36339.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_6_scaffold_876_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4403..4825)
DNA (423bp) protein (141aa)
Putative nickel-responsive regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS3_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transcriptional regulator
sw_6_scaffold_876_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5142..5576)
DNA (435bp) protein (145aa)
CopG family transcripitonal regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEF5_9EURY
CopG family transcripitonal regulator {ECO:0000313|EMBL:EMA55938.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
transcriptional regulator NikR
sw_6_scaffold_876_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5601..6449)
DNA (849bp) protein (283aa)
Putative sulfonate ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFL8_9EURY
Putative sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44168.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
ssuB; putative sulfonate ABC transporter ATP-binding protein
sw_6_scaffold_876_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6437..7285)
DNA (849bp) protein (283aa)
Sulfonate ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEH8_9EURY
Sulfonate ABC transporter permease {ECO:0000313|EMBL:EMA44167.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_6_scaffold_876_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7282..8352)
DNA (1071bp) protein (357aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL4_9EURY
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:EMA55941.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococ
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
sw_6_scaffold_876_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8491..8613)
DNA (123bp) protein (41aa)
Putative nickel-responsive regulator n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A4Z6_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilu
nikR2; CopG family transcriptional regulator NikR
Displaying 13 items

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