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sw_6_scaffold_893

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_893_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..887)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDF6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04949.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_893_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(977..1696)
DNA (720bp) protein (240aa)
DNA repair and recombination protein RadA n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NS42_HALBP
DNA repair and recombination protein rada
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halog
sw_6_scaffold_893_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1745..2011)
DNA (267bp) protein (89aa)
DNA repair and recombination protein RadA n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W542_9EURY
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarc
sw_6_scaffold_893_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2165..2809)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMY4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93779.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_893_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3223..4098)
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halo
Protease HtpX homolog n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NS45_HALBP
heat shock protein
sw_6_scaffold_893_6
unknown

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4249..4959
DNA (711bp) protein (237aa)

This feature has no annotations

sw_6_scaffold_893_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5003..5527
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4W9_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15586.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_893_8
unknown

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comp(5545..5928)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_6_scaffold_893_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6044..7177
DNA (1134bp) protein (378aa)
NMD3 family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTN0_9EURY
NMD3 family protein {ECO:0000313|EMBL:ELY65154.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
nonsense mediated mRNA decay-like protein
sw_6_scaffold_893_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7167..8189
DNA (1023bp) protein (341aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Methyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMX9_9EURY
methyltransferase
sw_6_scaffold_893_11
unknown

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8319..10631
DNA (2313bp) protein (771aa)

This feature has no annotations

sw_6_scaffold_893_12
unknown

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10761..11303
DNA (543bp) protein (181aa)

This feature has no annotations

sw_6_scaffold_893_13
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11460..12095)
DNA (636bp) protein (212aa)
Transposase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNA5_9EURY
Transposase {ECO:0000313|EMBL:ELY63012.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
transposase rbh
sw_6_scaffold_893_14
unknown

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12167..12682
DNA (516bp) protein (172aa)

This feature has no annotations

sw_6_scaffold_893_15
unknown

Not on your lists

12860..13336
DNA (477bp) protein (159aa)

This feature has no annotations

sw_6_scaffold_893_16
unknown

Not on your lists

13539..13631
DNA (93bp) protein (31aa)

This feature has no annotations

sw_6_scaffold_893_17
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13675..14022)
DNA (348bp) protein (116aa)
CRISPR-associated protein, Csh1 family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWL2_HALLT
CRISPR-associated protein, Csh1 family
CRISPR-associated protein, Csh1 family {ECO:0000313|EMBL:ACM58853.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
Displaying 17 items

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