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sw_6_scaffold_1022

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1022_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..1675
DNA (1674bp) protein (558aa)
Oxidoreductase-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNM1_9EURY
Oxidoreductase-like protein {ECO:0000313|EMBL:ELZ23459.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
glucose-methanol-choline oxidoreductase
sw_6_scaffold_1022_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1856..2161
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTK8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25752.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1022_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2547..2888
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25757.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
flagella cluster protein
sw_6_scaffold_1022_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2971..3330
DNA (360bp) protein (120aa)
Response regulator receiver protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX09_HALMD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACV46374.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_6_scaffold_1022_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3327..4568
DNA (1242bp) protein (414aa)
CheA histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV35_9EURY
CheA histidine kinase {ECO:0000313|EMBL:ELZ25759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
chemotaxis protein CheA
sw_6_scaffold_1022_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4568..5089
DNA (522bp) protein (174aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacte
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR71_9EURY
chemoreceptor glutamine deamidase CheD
sw_6_scaffold_1022_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5176..5607
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23621.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1022_8
unknown

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comp(5767..5913)
DNA (147bp) protein (49aa)
small CPxCG-related zinc finger protein
sw_6_scaffold_1022_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6158..7243)
DNA (1086bp) protein (362aa)
RecJ-like exonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP24_9EURY
RecJ-like exonuclease {ECO:0000313|EMBL:ELZ23619.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
RecJ-like exonuclease
sw_6_scaffold_1022_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7291..7659)
DNA (369bp) protein (123aa)
UpsA domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWF8_9EURY
UpsA domain-containing protein {ECO:0000313|EMBL:ESP87522.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
UspA domain-containing protein
sw_6_scaffold_1022_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7843..8370)
DNA (528bp) protein (176aa)
Acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK55_9EURY
Acetyltransferase {ECO:0000313|EMBL:ELZ23616.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
N-acetyltransferase GCN5
sw_6_scaffold_1022_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8367..10637)
DNA (2271bp) protein (757aa)
ABC transport protein {ECO:0000313|EMBL:ERJ06070.1}; EC=3.6.3.- {ECO:0000313|EMBL:ERJ06070.1};; ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CCQ33300.1}; TaxID=1033806 species="Arch
ABC transport protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQG6_9EURY
ABC transporter, ATP-binding/permease protein
sw_6_scaffold_1022_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10821..11339)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23613.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1022_trna_1
unknown

Not on your lists

11430..11503
DNA (74bp)
transferRNA
sw_6_scaffold_1022_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11695..12384
DNA (690bp) protein (230aa)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTD0_9EURY
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EMA48588.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
formimidoyltetrahydrofolate cyclodeaminase
Displaying 15 items

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