ggKbase home page

sw_6_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 44 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_114_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..476
DNA (474bp) protein (158aa)
transducer protein htr15; K03406 methyl-accepting chemotaxis protein id=24651015 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH12608.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
sw_6_scaffold_114_2
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(473..1468)
DNA (996bp) protein (332aa)
Transketolase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WSH1_9EURY
Transketolase {ECO:0000313|EMBL:ELY52156.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
transketolase
sw_6_scaffold_114_3
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1465..2475)
DNA (1011bp) protein (337aa)
Dehydrogenase E1 component n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BS21_9EURY
Dehydrogenase E1 component {ECO:0000313|EMBL:ELZ13218.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13
dehydrogenase E1 component
sw_6_scaffold_114_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2571..3602)
DNA (1032bp) protein (344aa)
Oxidoreductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJ72_HALJP
aryl-alcohol dehydrogenase
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:AJF25054.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;
sw_6_scaffold_114_5
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3760..4545
DNA (786bp) protein (262aa)
Transcriptional regulator, DeoR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RXB0_HALTV
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ADB61634.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena tu
sw_6_scaffold_114_6
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4466..4744)
DNA (279bp) protein (93aa)
Phosphocarrier protein HPr n=5 Tax=Haloferax RepID=D4GUP8_HALVD
ptsH3; phosphocarrier protein HPr
Phosphocarrier protein HPr {ECO:0000313|EMBL:ADE04358.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATC
sw_6_scaffold_114_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5075..6784
DNA (1710bp) protein (570aa)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RXA5_HALTV
phosphoenolpyruvate-protein phosphotransferase
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:ADB61629.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.
sw_6_scaffold_114_8
unknown

Not on your lists

6781..6975
DNA (195bp) protein (65aa)

This feature has no annotations

sw_6_scaffold_114_9
unknown

Not on your lists

comp(7065..7661)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_6_scaffold_114_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7734..9269)
DNA (1536bp) protein (512aa)
Phosphotransferase system component IIC n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ0_HALVD
PTS system, galactitol-specific enzyme II, C component
Galactitol permease IIC component {ECO:0000313|EMBL:CQR48678.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;
sw_6_scaffold_114_11
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9456..9743)
DNA (288bp) protein (96aa)
Presumptive arabitol PTS enzyme IIB n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZ76_9EURY
Presumptive arabitol PTS enzyme IIB {ECO:0000313|EMBL:ELZ89028.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifont
presumptive arabitol PTS enzyme IIB
sw_6_scaffold_114_12
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9972..10418
DNA (447bp) protein (149aa)
PTS system, galactitol-specific enzyme II, A component (EC:2.7.1.69)
PTS system, galactitol-specific enzyme II, A component n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HA28_9EURY
PTS system, galactitol-specific enzyme II, A component {ECO:0000313|EMBL:ELZ79979.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
sw_6_scaffold_114_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10701..11411)
DNA (711bp) protein (237aa)
Septum site-determining protein MinD n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L720_HALJP
septum formation initiator
Septum site-determining protein MinD {ECO:0000313|EMBL:EMA28893.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula jap
sw_6_scaffold_114_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11498..13459)
DNA (1962bp) protein (654aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWG3_HALBP
Chromosome segregation protein (Spc25, Csm1, Pcs1)
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ADQ69383.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
sw_6_scaffold_114_15

Not on your lists

comp(13616..14272)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y2Z7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07011.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_6_scaffold_114_16
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14772..15767)
DNA (996bp) protein (332aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JEP2_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase 2 {ECO:0000313|EMBL:CQR52052.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
sw_6_scaffold_114_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15777..16946)
DNA (1170bp) protein (390aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JVN0_9EURY
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37092.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
sw_6_scaffold_114_18
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17046..17891)
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQN2_STRRD
binding-protein-dependent transporter inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ86429.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosp
sw_6_scaffold_114_19
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17884..18837)
DNA (954bp) protein (318aa)
Permease component of ABC-type sugar transporter n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EF09_THECK
sugar ABC transporter permease
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AGA58853.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;"
sw_6_scaffold_114_20
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18839..20356)
DNA (1518bp) protein (506aa)
Extracellular solute-binding protein family 1 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUV1_DESRL
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEG61348.1}; Flags: Precursor;; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.
sw_6_scaffold_114_21
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20554..21837)
DNA (1284bp) protein (428aa)
SAF domain protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKW5_HALHG
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADQ15706.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Ha
sw_6_scaffold_114_22
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(21893..23425)
DNA (1533bp) protein (511aa)
Carbohydrate kinase FGGY n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH75_THET1
carbohydrate kinase FGGY
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACZ43096.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
sw_6_scaffold_114_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23514..24926)
DNA (1413bp) protein (471aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3W7_9EURY
sw_6_scaffold_114_24
unknown

Not on your lists

comp(24898..25074)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_6_scaffold_114_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25233..25787)
DNA (555bp) protein (185aa)
MCP domain-containing signal transducer n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLW5_9EURY
MCP domain-containing signal transducer {ECO:0000313|EMBL:ELZ24241.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
methyl-accepting chemotaxis sensory transducer
sw_6_scaffold_114_26
unknown

Not on your lists

26096..26275
DNA (180bp) protein (60aa)

This feature has no annotations

sw_6_scaffold_114_27
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27774..28604
DNA (831bp) protein (277aa)
Dihydrolipoamide S-acetyltransferase {ECO:0000313|EMBL:AKH97375.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AKH97375.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LU57_9EURY
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
sw_6_scaffold_114_28
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28965..29753
DNA (789bp) protein (263aa)
ArcR family transcription regulator n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G028_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ65651.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
arcR3; ArcR family transcription regulator
sw_6_scaffold_114_29
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30116..31597
DNA (1482bp) protein (494aa)
Xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=3 Tax=Haloferax RepID=M0F8I4_9EURY
Xylulose kinase {ECO:0000313|EMBL:ELZ56351.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
sw_6_scaffold_114_30
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31648..31977)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR47_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA11446.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
Displaying items 1-30 of 44 in total

View Taxonomy