ggKbase home page

sw_6_scaffold_559

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_559_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..918
DNA (918bp) protein (306aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY99_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ELZ27412.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimp
class IV aminotransferase
sw_6_scaffold_559_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(970..2043)
DNA (1074bp) protein (358aa)
Saccharopine dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CXQ2_9EURY
Saccharopine dehydrogenase {ECO:0000313|EMBL:ELZ27413.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
Saccharopine dehydrogenase
sw_6_scaffold_559_3
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2156..2608
DNA (453bp) protein (151aa)
Rieske iron-sulfur domain protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BKF2_9EURY
Rieske iron-sulfur domain protein {ECO:0000313|EMBL:ELZ11335.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermo
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
sw_6_scaffold_559_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2793..3083)
DNA (291bp) protein (97aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWJ4_9EURY
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:ELZ27601.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
hypothetical protein
sw_6_scaffold_559_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3174..4559
DNA (1386bp) protein (462aa)
Na+/Ca2+-exchanging protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY93_9EURY
Na+/Ca2+-exchanging protein {ECO:0000313|EMBL:ELZ27407.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
sodium:calcium antiporter
sw_6_scaffold_559_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4561..6144
DNA (1584bp) protein (528aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1033806 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NXT8_9EURY
D-aminoacyl-tRNA deacylase
sw_6_scaffold_559_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6334..7494
DNA (1161bp) protein (387aa)
Cell division protein FtsZ n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW20_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
cell division protein FtsZ
sw_6_scaffold_559_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7567..9198
DNA (1632bp) protein (544aa)
Trk active potasium channel n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L267_9EURY
Trk active potasium channel {ECO:0000313|EMBL:EMA26085.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica
trk; trk active potasium channel
sw_6_scaffold_559_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9247..9423
DNA (177bp) protein (59aa)
Protein translocase subunit SecE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY87_9EURY
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=797114 species="Archaea; Euryarchaeot
secE; preprotein translocase subunit SecE
sw_6_scaffold_559_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9423..9860
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVY0_9EURY
NusG antitermination factor
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
sw_6_scaffold_559_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10029..10403
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IC51_9EURY
NADH-binding protein {ECO:0000313|EMBL:AHG02526.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
NmrA family protein
sw_6_scaffold_559_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10403..10936
DNA (534bp) protein (178aa)
NmrA family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ03_9EURY
NmrA family protein {ECO:0000313|EMBL:ELZ27657.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
nucleoside-diphosphate sugar epimerase
sw_6_scaffold_559_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11013..11741
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27656.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_559_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11722..11892)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003694696
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47197.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_559_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12073..13062
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0I3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27654.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_559_16
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13059..13811)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JPA3_NATP1
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB32678.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellir
sw_6_scaffold_559_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14015..15091)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHU0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35000.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_6_scaffold_559_trna_3
unknown

Not on your lists

comp(15239..15311)
DNA (73bp)
transferRNA
sw_6_scaffold_559_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15497..16108
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27653.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_559_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16121..16747
DNA (627bp) protein (209aa)
Response regulator receiver protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYZ8_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:ELZ27652.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
sw_6_scaffold_559_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16838..17116
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWS4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27650.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_6_scaffold_559_21
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17286..17588)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KX98_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA24864.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_6_scaffold_559_trna_2
unknown

Not on your lists

comp(18001..18071)
DNA (71bp)
transferRNA
sw_6_scaffold_559_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18241..19074
DNA (834bp) protein (278aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=485914 species="
NAD synthetase n=1 Tax=Halomicrobium katesii RepID=UPI00035E0F53
NAD synthetase
sw_6_scaffold_559_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19096..19728)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_559_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20086..20901
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26853.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_559_trna_1
unknown

Not on your lists

20892..20963
DNA (72bp)
transferRNA
sw_6_scaffold_559_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21165..22298
DNA (1134bp) protein (378aa)
Integrase family protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K489_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA14670.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
integrase family protein
Displaying 28 items

View Taxonomy