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sw_6_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_72_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1368
DNA (1368bp) protein (456aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSI7_9EURY
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:ELZ25598.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
etfA2; electron transfer flavoprotein subunit alpha
sw_6_scaffold_72_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1408..3075
DNA (1668bp) protein (556aa)
FAD dependent oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUP5_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ25599.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
flavoprotein
sw_6_scaffold_72_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3085..3450
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25600.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_72_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3605..4336
DNA (732bp) protein (244aa)
Acetyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV1_9EURY
Acetyl transferase {ECO:0000313|EMBL:ELZ25601.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
acetyltransferase
sw_6_scaffold_72_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4344..4562)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25603.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_72_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4559..5050)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25604.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_72_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5047..7389)
DNA (2343bp) protein (781aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT1_9EURY
hypothetical protein
sw_6_scaffold_72_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8161..8391
DNA (231bp) protein (77aa)
30S ribosomal protein S28e n=2 Tax=Halobacteriaceae RepID=M0CT81_9EURY
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
30S ribosomal protein S28e
sw_6_scaffold_72_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8391..8822
DNA (432bp) protein (144aa)
Ribosomal protein L24E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZG1_HALMD
50S ribosomal protein L24E
Ribosomal protein L24E {ECO:0000313|EMBL:ACV48729.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
sw_6_scaffold_72_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8819..9298
DNA (480bp) protein (160aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ3_9EURY
sw_6_scaffold_72_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9383..10270
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKU9_9EURY
conserved hypothetical protein (DUF4380)
Uncharacterized protein {ECO:0000313|EMBL:ERJ06140.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_6_scaffold_72_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10404..11423
DNA (1020bp) protein (340aa)
Phosphotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQW0_9EURY
Phosphotransferase {ECO:0000313|EMBL:ELZ25611.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
phosphotransferase
sw_6_scaffold_72_13
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11473..11922
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSS9_9EURY
hypothetical protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
sw_6_scaffold_72_14
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11919..12341)
DNA (423bp) protein (141aa)
hypothetical protein id=24617189 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH08004.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_6_scaffold_72_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12497..13021)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25615.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_72_16
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13117..14187)
DNA (1071bp) protein (357aa)
metE; methionine synthase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase n=2 Tax=Haloarcula RepID=Q5V591_HALMA
Methionine synthase {ECO:0000313|EMBL:EMA21998.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 3379
sw_6_scaffold_72_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14184..15194)
DNA (1011bp) protein (337aa)
Cobalamin-independent synthase MetE domain-containing protein (Fragment) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQC7_9EURY
Cobalamin-independent synthase MetE domain-containing protein {ECO:0000313|EMBL:ELZ25446.1}; Flags: Fragment;; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
methionine synthase II (cobalamin-independent)
sw_6_scaffold_72_18
unknown

Not on your lists

15293..15565
DNA (273bp) protein (91aa)

This feature has no annotations

sw_6_scaffold_72_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15576..16244)
DNA (669bp) protein (223aa)
Methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CS23_9EURY
Methyltransferase {ECO:0000313|EMBL:ELZ25448.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
hemK; protporphyrinogen oxidase
sw_6_scaffold_72_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16241..17110)
DNA (870bp) protein (290aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CU99_9EURY
ksgA; dimethyladenosine transferase
sw_6_scaffold_72_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17103..17681)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25450.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_72_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17722..18078)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ25451.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ25451.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD3_9EURY
RNA polymerase Rpb4
sw_6_scaffold_72_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18075..18365)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSS7_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L21
sw_6_scaffold_72_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18497..18763)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CS29_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=797114
ef1B; elongation factor 1-beta
sw_6_scaffold_72_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18766..18945)
DNA (180bp) protein (60aa)
Zn-ribbon RNA-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUA6_9EURY
Zn-ribbon RNA-binding protein {ECO:0000313|EMBL:ELZ25454.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
hypothetical protein
sw_6_scaffold_72_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19021..19665)
DNA (645bp) protein (215aa)
oxidoreductase n=1 Tax=Halomicrobium katesii RepID=UPI00037A0B88
oxidoreductase FAD-binding domain protein
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:ACV49191.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
sw_6_scaffold_72_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19875..21656
DNA (1782bp) protein (594aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein n=2 Tax=Halobacteriaceae RepID=M0CQD9_9EURY
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ25456.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
sw_6_scaffold_72_28
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21653..22516
DNA (864bp) protein (288aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LDU0_HALJP
2-oxoacid ferredoxin oxidoreductase
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EMA30120.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" sourc
sw_6_scaffold_72_29
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22667..24157
DNA (1491bp) protein (497aa)
Photolyase/cryptochrome n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LAH6_HALJP
Photolyase/cryptochrome {ECO:0000313|EMBL:EMA30118.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
phr1; photolyase/cryptochrome
sw_6_scaffold_72_30
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24281..25129
DNA (849bp) protein (283aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YW31_9EURY
UbiA prenyltransferase
Displaying items 1-30 of 61 in total

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