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sw_6_scaffold_406_25

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: 22325..22786

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMN6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 153.0
  • Bit_score: 266
  • Evalue 1.90e-68
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.; similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 153.0
  • Bit_score: 266
  • Evalue 2.70e-68
50S ribosomal protein L17e (L22p) similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 152.0
  • Bit_score: 262
  • Evalue 5.90e-68

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 462
ATGGGAATCAGCTACTCAGTCGACGTAGACCCGGACACGACGGCGAAAGCGATGCTCCGGGAGCGTCAGATCAGCCTCAAGCACAGCAAGGCCCTCGCCCGGGAGATCTCGGGGATGACGGCCGCCGAGGCCGTCGACTACCTCGAGGCGGTCATCGCGGGCGAGCAGTCGGTCCCGTTCCGCCAGCACAACTCGGGCGTCGGCCACAGGAACGACATCGAGGGGTGGGACGCGGGCCGCTACCCCGAGAAGGCCAGCGAGGCCTTCCTCGACCTGCTGGAGAACGCCGTCGGCAACGCCGACCACCAGGGGTTCGACGGCGAGGCCATGCAGATTGCCCACGTCGCCCCCCACAAGGTCGGCGAGTCCCGCGGCCGCAAGCCCCGCGCGATGGGGCGTGCCAGCCCGTGGAACACCCCCGAGGTCGACGTCGAACTCGTCCTAGAGGAGGCCGACGAATAA
PROTEIN sequence
Length: 154
MGISYSVDVDPDTTAKAMLRERQISLKHSKALAREISGMTAAEAVDYLEAVIAGEQSVPFRQHNSGVGHRNDIEGWDAGRYPEKASEAFLDLLENAVGNADHQGFDGEAMQIAHVAPHKVGESRGRKPRAMGRASPWNTPEVDVELVLEEADE*