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sw_6_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_406_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..267)
DNA (267bp) protein (89aa)
msrA3; peptide methionine sulfoxide reductase MsrA (S-form specific) (EC:1.8.4.11)
msrA; peptide methionine sulfoxide reductase (S-form specific) id=24629247 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ERG92000.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
sw_6_scaffold_406_2
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(264..692)
DNA (429bp) protein (143aa)
msrB1; peptide methionine sulfoxide reductase (R-form specific) (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=24621678 bin=Halonotius_J07HN6 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ERH05550.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.
msrB; peptide methionine sulfoxide reductase (R-form specific)
sw_6_scaffold_406_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

785..1363
DNA (579bp) protein (193aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cytidylate kinase n=1 Tax=Halomicrobium katesii RepID=UPI000381FB17
sw_6_scaffold_406_4
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2134..3057)
DNA (924bp) protein (308aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SXN0_NATMM
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADD05979.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (stra
sw_6_scaffold_406_5
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3374..4081
DNA (708bp) protein (236aa)
Short-chain family oxidoreductase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FWQ6_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ63728.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense D
short-chain family oxidoreductase
sw_6_scaffold_406_6
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4143..5123)
DNA (981bp) protein (327aa)
Xylose dehydrogenase (NADP) n=3 Tax=Haloferax RepID=L5NPN0_9EURY
Xylose dehydrogenase (NADP) {ECO:0000313|EMBL:ELZ77507.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (strain
xylose dehydrogenase (NADP) rbh
sw_6_scaffold_406_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5197..5826)
DNA (630bp) protein (210aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8K8_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EMA54297.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococ
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
sw_6_scaffold_406_8
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6180..7688)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A5E6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52849.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
L-xylulose kinase protein
sw_6_scaffold_406_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7681..8718)
DNA (1038bp) protein (346aa)
Fructose/tagatose-1,6-bisphosphate aldolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB19_9EURY
Fructose/tagatose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EMA54299.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
fructose/tagatose-1,6-bisphosphate aldolase
sw_6_scaffold_406_10
unknown

Not on your lists

comp(8736..9149)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_6_scaffold_406_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9271..10203)
DNA (933bp) protein (311aa)
Sugar ABC transporter permease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTK5_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA35734.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
ABC transporter permease
sw_6_scaffold_406_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10205..11167)
DNA (963bp) protein (321aa)
Sugar ABC transporter permease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRK7_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA35733.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
tsgB7; sugar ABC transporter permease
sw_6_scaffold_406_13
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11196..12572)
DNA (1377bp) protein (459aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FUK5_9EURY
Putative sugar-binding periplasmic protein {ECO:0000313|EMBL:CQR51795.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp.
tsgA7; sugar ABC transporter substrate-binding protein
sw_6_scaffold_406_14
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12694..13851)
DNA (1158bp) protein (386aa)
ABC transporter {ECO:0000313|EMBL:CDK40481.1}; EC=3.6.3.20 {ECO:0000313|EMBL:CDK40481.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
ABC transporter n=1 Tax=Halorubrum sp. AJ67 RepID=V6DX93_9EURY
tsgD1; putative sugar ABC transporter ATP-binding protein
sw_6_scaffold_406_15
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13965..14774)
DNA (810bp) protein (270aa)
Diketogulonate related aldo/keto reductase n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1Q4P8_9EURY
Diketogulonate related aldo/keto reductase {ECO:0000313|EMBL:ERG99926.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadr
aldo/keto reductase
sw_6_scaffold_406_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14890..15705)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L9R9_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28680.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_406_17
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15879..16478
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R808_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20368.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_6_scaffold_406_trna_1
unknown

Not on your lists

comp(16646..16716)
DNA (71bp)
transferRNA
sw_6_scaffold_406_18
unknown

Not on your lists

17006..18166
DNA (1161bp) protein (387aa)

This feature has no annotations

sw_6_scaffold_406_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18446..19339
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23145.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_406_20
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


19343..20251
DNA (909bp) protein (303aa)
50S ribosomal protein L3 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBJ2_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
rplC; 50S ribosomal protein L3P
sw_6_scaffold_406_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


20255..20998
DNA (744bp) protein (248aa)
50S ribosomal protein L4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKJ6_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
50S ribosomal protein L4
sw_6_scaffold_406_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


20995..21252
DNA (258bp) protein (86aa)
50S ribosomal protein L23P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL96_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L23
sw_6_scaffold_406_23
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21656..21904
DNA (249bp) protein (83aa)
50S ribosomal protein L2 n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0ABJ1_9EURY
rpl2p; 50S ribosomal protein L2P
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" so
sw_6_scaffold_406_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21901..22323
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIN1_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
30S ribosomal protein S15e (S19p)
sw_6_scaffold_406_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22325..22786
DNA (462bp) protein (154aa)
50S ribosomal protein L22P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMN6_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
50S ribosomal protein L17e (L22p)
sw_6_scaffold_406_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22786..23790
DNA (1005bp) protein (335aa)
30S ribosomal protein S3 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKJ1_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
30S ribosomal protein S3e (S3p)
sw_6_scaffold_406_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23787..23993
DNA (207bp) protein (69aa)
50S ribosomal protein L29P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL92_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L29P
sw_6_scaffold_406_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24040..24333
DNA (294bp) protein (98aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIS7_9EURY
ribonuclease P
sw_6_scaffold_406_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24324..24692
DNA (369bp) protein (123aa)
30S ribosomal protein S17P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIM6_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:ELZ23135.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
30S ribosomal protein S11e (S17p)
Displaying items 1-30 of 46 in total

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