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SW_6_Actinobacteria_72_12

In projects: SW_6

Consensus taxonomy: Actinobacteria → Actinobacteria → Bacteria

Taxonomy override: Actinobacteria

Metagenomic Context

Parent: SW_6_UNK

Properties

Avg. coverage: 11.71 Longest contig: 10.60 Kbp Bin length: 724.69 Kbp GC content: 71.73 %

Contigs count: 315 Features count: 907 rRNAs count: 0 tRNAs count: 6

Genome completeness

partial RP 29 / 55 BSCG 27 / 51 MC: 1 ASCG 7 / 38

Displaying items 301-315 of 315 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_6_scaffold_12798 Species: marine actinobacterium MedAcidi-G2A (100%)	2	1276 bp	76.33	12.15	100.16
sw_6_scaffold_12931 Species: Acidothermus cellulolyticus (50%)	2	1267 bp	74.11	13.10	100.16
sw_6_scaffold_12941 Species: Nakamurella multipartita (50%)	2	1267 bp	74.74	12.47	100.16
sw_6_scaffold_5633 Class: Actinobacteria (66.67%)	3	2282 bp	72.74	13.72	100.18
sw_6_scaffold_8652 Species: Ilumatobacter coccineus (50%)	2	1686 bp	72.60	8.72	100.18
sw_6_scaffold_12493 Species: Kineococcus radiotolerans (50%)	2	1299 bp	76.14	13.16	100.23
sw_6_scaffold_17698 Class: Actinobacteria (66.67%)	3	1601 bp	70.08	13.43	100.25
sw_6_scaffold_24256 Species: RBG_16_Actinobacteria_68_12_curated (50%)	2	1194 bp	70.77	11.31	100.25
sw_6_scaffold_15463 Species: Blastococcus saxobsidens (50%)	2	1116 bp	73.12	12.28	100.27
sw_6_scaffold_17119 Class: Actinobacteria (66.67%)	3	1035 bp	74.01	15.17	100.58
sw_6_scaffold_9590 Class: Actinobacteria (50%)	4	2770 bp	74.66	12.64	100.83
sw_6_scaffold_18867 Species: Micromonospora sp. ATCC 39149 (50%)	2	1517 bp	72.58	13.18	101.06
sw_6_scaffold_13728 Class: Actinobacteria (66.67%)	3	2197 bp	69.28	12.34	101.59
sw_6_scaffold_6908 Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (66.67%)	3	4008 bp	69.34	10.68	101.72
sw_6_scaffold_5286 Class: Actinobacteria (60%)	5	2836 bp	73.77	12.02	102.29

Displaying items 301-315 of 315 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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