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sw_6_scaffold_132

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_132_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

sw_6_scaffold_132_2
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(114..641)
DNA (528bp) protein (176aa)
Putative membrane protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9THB2_9CYAN
Magnesium transporter MgtC {ECO:0000313|EMBL:KIJ74485.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
sw_6_scaffold_132_3
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(706..1869)
DNA (1164bp) protein (388aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FXT3_9CYAN
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:CBN55173.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Os
amino acid ABC transporter membrane protein 1, PAAT family
sw_6_scaffold_132_4
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1929..2978)
DNA (1050bp) protein (350aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GNI8_9CYAN
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EKQ70552.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales
amino acid ABC transporter substrate-binding protein/signal transduction system
sw_6_scaffold_132_5
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3288..4220)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UAY0_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN15102.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
sw_6_scaffold_132_6
unknown

Not on your lists

comp(4327..4455)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_6_scaffold_132_7
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4490..4984)
DNA (495bp) protein (165aa)
Photosystem I reaction centre subunit III n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DK29_9CHRO
Photosystem I reaction centre subunit III {ECO:0000313|EMBL:ERN40934.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacun
photosystem I reaction center protein PsaF subunit III
sw_6_scaffold_132_8
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists


5132..6187
DNA (1056bp) protein (352aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X2Q6_9NOST
sw_6_scaffold_132_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6216..6965)
DNA (750bp) protein (250aa)
CheB methylesterase (EC:3.1.1.61)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI000302FF55
Chemotaxis protein {ECO:0000313|EMBL:KIJ76870.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
sw_6_scaffold_132_10
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7158..7868
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00031AC9C0
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIJ84289.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB
CarD family transcriptional regulator
sw_6_scaffold_132_11
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8081..8338)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XYY0_STAC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ37239.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_6_scaffold_132_12
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

8881..9621
DNA (741bp) protein (247aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T347_9CYAN
sw_6_scaffold_132_13
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9766..12273
DNA (2508bp) protein (836aa)
Surface antigen (D15) n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCG8_HALP7
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AFZ44646.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halo
sw_6_scaffold_132_14
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12311..13300
DNA (990bp) protein (330aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase (EC:3.5.1.108)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VX02_9CYAN
sw_6_scaffold_132_15
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13375..13896
DNA (522bp) protein (174aa)
3-hydroxyacyl-(acyl-carrier-protein) dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF10_9CHRO
sw_6_scaffold_132_16
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14055..14861
DNA (807bp) protein (269aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VVU7_9CYAN
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
sw_6_scaffold_132_17
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

14889..16058
DNA (1170bp) protein (390aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:AFY76516.1}; EC=2.4.1.182 {ECO:0000313|EMBL:AFY76516.1};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleuroca
Lipid-A-disaccharide synthase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2Y3_9CYAN
sw_6_scaffold_132_18
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16306..18036)
DNA (1731bp) protein (577aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TAE0_9CYAN
multidrug ABC transporter ATPase/permease
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AFY79505.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp.
sw_6_scaffold_132_19
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18266..19051
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VXM9_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX73300.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
sw_6_scaffold_132_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

19167..20093
DNA (927bp) protein (309aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9N9_9CYAN
putative sugar kinase
sw_6_scaffold_132_21
unknown

Not on your lists

20502..20759
DNA (258bp) protein (86aa)

This feature has no annotations

sw_6_scaffold_132_22
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21203..21670)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002FF853A
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ACC79530.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
sw_6_scaffold_132_23
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(21908..22828)
DNA (921bp) protein (307aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6E0_9CYAN
ornithine carbamoyltransferase
sw_6_scaffold_132_24
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23226..24854
DNA (1629bp) protein (543aa)
Putative dienelactone hydrolase n=1 Tax=Moorea producens 3L RepID=F4Y1W4_9CYAN
Putative dienelactone hydrolase {ECO:0000313|EMBL:EGJ29256.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
dienelactone hydrolase
sw_6_scaffold_132_25
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24953..25690)
DNA (738bp) protein (246aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YA18_HALP7
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AFZ43322.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halot
sw_6_scaffold_132_26
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25966..26256
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLW9_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ33056.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
sw_6_scaffold_132_27
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26303..27016
DNA (714bp) protein (238aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WGZ6_9CYAN
Displaying 27 items

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