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sw_6_scaffold_311

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_311_1
unknown

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_6_scaffold_311_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

534..1010
DNA (477bp) protein (159aa)
Membrane protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW57_HALBP
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AHG00571.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_6_scaffold_311_3
unknown

Not on your lists

comp(1032..1148)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_6_scaffold_311_4
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..2315)
DNA (1158bp) protein (386aa)
citronellyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
citronellyl-CoA dehydrogenase (EC:1.3.99.-)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00035F8F96
sw_6_scaffold_311_5
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(2318..2581)
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
sw_6_scaffold_311_6
Streptomyces prunicolor, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2581..3111)
DNA (531bp) protein (177aa)
hypothetical protein, partial n=1 Tax=Streptomyces prunicolor RepID=UPI0003780DCB
sw_6_scaffold_311_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..3798)
DNA (684bp) protein (228aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA87383.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
sw_6_scaffold_311_8
unknown

Not on your lists

comp(3795..4628)
DNA (834bp) protein (278aa)

This feature has no annotations

sw_6_scaffold_311_9
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4621..5409)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000367E0E7
Uncharacterized protein {ECO:0000313|EMBL:KIF20057.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
tRNA synthetase class II (G H P and S)
sw_6_scaffold_311_10
unknown

Not on your lists

comp(5381..5629)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_6_scaffold_311_11
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5622..6776)
DNA (1155bp) protein (385aa)
putative acid--CoA ligase (EC:6.2.1.-)
Putative acid--CoA ligase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1E9_ANATU
Male sterility domain-containing protein {ECO:0000313|EMBL:KDB06344.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="
sw_6_scaffold_311_12
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6778..7725)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003820C29
3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain-containing protein {ECO:0000313|EMBL:KDB06345.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
hypothetical protein
sw_6_scaffold_311_13
unknown

Not on your lists

comp(7685..8422)
DNA (738bp) protein (246aa)

This feature has no annotations

sw_6_scaffold_311_14
unknown

Not on your lists

8441..8932
DNA (492bp) protein (164aa)

This feature has no annotations

sw_6_scaffold_311_15
GWA1_OP11_39_21_plus, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8936..9382
DNA (447bp) protein (149aa)
Bacterio-opsin linked product n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAV3_ANADF
Uncharacterized protein {ECO:0000313|EMBL:KKR13917.1}; TaxID=1618551 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_39_21b.;"
bacterio-opsin linked protein
sw_6_scaffold_311_16
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9391..10008
DNA (618bp) protein (206aa)
aas; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase (EC:2.3.1.40 6.2.1.20)
2-acyl-glycerophospho-ethanolamine acyltransferase n=1 Tax=Proteus mirabilis RepID=UPI00035DC962
sw_6_scaffold_311_17
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10029..11105)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000374A766
Wenxma_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ67640.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wen
hypothetical protein
sw_6_scaffold_311_18
unknown

Not on your lists

comp(11487..12341)
DNA (855bp) protein (285aa)

This feature has no annotations

sw_6_scaffold_311_trna_1
unknown

Not on your lists

comp(12810..12881)
DNA (72bp)
transferRNA
sw_6_scaffold_311_19
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

comp(12968..13825)
DNA (858bp) protein (286aa)
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel Tax=RIFOXYD1_FULL_OD1_48_21_curated
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel id=4303172 bin=GWF2_Bacteroidetes_41_9 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel
sw_6_scaffold_311_20
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(13833..14687)
DNA (855bp) protein (285aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
nfo; putative endonuclease 4 (EC:3.1.21.2)
Putative AP endonuclease family 2 n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9U7_9ZZZZ id=5539 bin=ACD12 species=uncultured marine microorganism HF4000_APKG7H23 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
sw_6_scaffold_311_21
unknown

Not on your lists

comp(14717..15478)
DNA (762bp) protein (254aa)

This feature has no annotations

sw_6_scaffold_311_22
GWA2_OD1_47_7, Parcubacteria, Bacteria

Not on your lists

comp(15489..17066)
DNA (1578bp) protein (526aa)
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=uncultured bacterium RepID=K2F160_9BACT
CTP synthetase Tax=GWA2_OD1_47_7
sw_6_scaffold_311_23

Not on your lists

comp(17070..17345)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003688D70
hypothetical protein
Cell division protein FtsX {ECO:0000313|EMBL:KKR47150.1}; TaxID=1618903 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
sw_6_scaffold_311_24
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17336..17974)
DNA (639bp) protein (213aa)
membrane protein of unknown function Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
cell division protein; K09811 cell division transport system permease protein id=5803703 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
sw_6_scaffold_311_25
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17976..18692)
DNA (717bp) protein (239aa)
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein id=5803704 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division ATP-binding protein FtsE
sw_6_scaffold_311_26
Leuconostoc citreum, Leuconostoc, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18699..18854)
DNA (156bp) protein (52aa)
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=33964 species="Bacteria; Firmicutes; Bacilli; Lact
sw_6_scaffold_311_27
R_OD1_Nomurabacteria_41_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18818..19531)
DNA (714bp) protein (238aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_12_curated
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 id=5803707 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptide chain release factor 2
sw_6_scaffold_311_28
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19585..20121)
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
Displaying 29 items

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