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sw_6_scaffold_469

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_469_1
unknown

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_6_scaffold_469_2
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists

comp(274..1029)
DNA (756bp) protein (252aa)
Alpha/beta superfamily hydrolase/acyltransferase n=1 Tax=uncultured bacterium RepID=K2EZW5_9BACT
alpha/beta hydrolase family protein Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
carboxylesterase BioH
sw_6_scaffold_469_3
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(998..1459)
DNA (462bp) protein (154aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
PAS/PAC sensor signal transduction histidine kinase id=1779307 bin=GWE2_Spirochaete_31_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Holliday junction resolvase
sw_6_scaffold_469_trna_1
unknown

Not on your lists

1609..1697
DNA (89bp)
transferRNA
sw_6_scaffold_469_4
unknown

Not on your lists

comp(1941..2276)
DNA (336bp) protein (112aa)

This feature has no annotations

sw_6_scaffold_469_5
RHI_OD1_Uhrbacteria_60_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2358..3521
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C78F4
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated
hypothetical protein
sw_6_scaffold_469_6
R_RIF_OD1_10_39_26, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

3527..3985
DNA (459bp) protein (153aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_10_39_26_curated
Putative uncharacterized protein id=3305474 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
sw_6_scaffold_469_7
CG_CPR03_01, CG_CPR03, Bacteria

Not on your lists

4737..5495
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00037BC903
coagulation factor 5/8 type domain-containing protein Tax=CG_CPR03_01
sw_6_scaffold_469_8
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5614..6195
DNA (582bp) protein (194aa)
hypothetical protein Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
sw_6_scaffold_469_9
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6185..6487
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000379F8C4
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
sw_6_scaffold_469_trna_3
unknown

Not on your lists

comp(7574..7646)
DNA (73bp)
transferRNA
sw_6_scaffold_469_10
unknown

Not on your lists

comp(7717..8088)
DNA (372bp) protein (124aa)

This feature has no annotations

sw_6_scaffold_469_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(8163..8588)
DNA (426bp) protein (142aa)
heat shock protein Hsp20 n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624D2B
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
molecular chaperone (small heat shock protein)
sw_6_scaffold_469_12
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8702..8968)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS20_HALOH
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix oreni
sw_6_scaffold_469_13
unknown

Not on your lists

comp(9032..9139)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_6_scaffold_469_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9231..9809
DNA (579bp) protein (193aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=CG_Nomura_04
Holliday junction ATP-dependent DNA helicase RuvA id=5227448 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
holliday junction DNA helicase ruva
sw_6_scaffold_469_15
R_OD1_Campbellbacteria_34_15, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

9802..11067
DNA (1266bp) protein (422aa)
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=5803224 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
sw_6_scaffold_469_16
unknown

Not on your lists

comp(11123..11536)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_6_scaffold_469_17
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(11597..12061)
DNA (465bp) protein (155aa)
tRNA/rRNA methyltransferase (SpoU) Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
tRNA/rRNA methyltransferase SpoU id=15189825 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tRNA/rRNA methyltransferase SpoU
sw_6_scaffold_469_trna_2
unknown

Not on your lists

12251..12321
DNA (71bp)
transferRNA
sw_6_scaffold_469_18
unknown

Not on your lists

12265..12498
DNA (234bp) protein (78aa)

This feature has no annotations

sw_6_scaffold_469_19
unknown

Not on your lists

comp(12689..13717)
DNA (1029bp) protein (343aa)

This feature has no annotations

sw_6_scaffold_469_20
GWA2_OD1_49_9, Parcubacteria, Bacteria

Not on your lists

comp(13888..14595)
DNA (708bp) protein (236aa)
hypothetical protein Tax=GWA2_OD1_49_9
id=5803220 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_469_21
R_RIF_OD1_10_39_26, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(14598..16985)
DNA (2388bp) protein (796aa)
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_10_39_26_curated
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=5803218 bin=OD1_GWC2_34_28 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polA; DNA polymerase I (EC:2.7.7.7)
sw_6_scaffold_469_22
R_OD1_Kaiserbacteria_53_29, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16969..17415)
DNA (447bp) protein (149aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_29_curated
Putative uncharacterized protein id=4731870 bin=GWC2_OD1_43_27 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
sw_6_scaffold_469_23
unknown

Not on your lists

comp(17647..18309)
DNA (663bp) protein (221aa)

This feature has no annotations

sw_6_scaffold_469_24
unknown

Not on your lists

comp(18525..18950)
DNA (426bp) protein (142aa)

This feature has no annotations

sw_6_scaffold_469_25
GWA2_OD1_44_15_partial, Parcubacteria, Bacteria

Not on your lists

19070..19894
DNA (825bp) protein (275aa)
Putative type II secretion system protein E Tax=GWA2_OD1_44_15_partial
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
MSHA biogenesis protein MshE/Type II secretory pathway
Displaying 28 items

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