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sw_6_scaffold_646

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_646_1
RIFOXYD1_FULL_OD1_Kaiserbacteria_42_15_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..1651)
DNA (1650bp) protein (550aa)
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFOXYD1_FULL_OD1_Kaiserbacteria_42_15_curated
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=5803184 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent DNA helicase PcrA
sw_6_scaffold_646_2
RLO_OD1_Kaiserbacteria_50_28, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

1934..2959
DNA (1026bp) protein (342aa)
peptidase M23 family protein Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_50_28_curated
peptidase M23 family protein id=5803183 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Peptidase M23
sw_6_scaffold_646_3
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

2977..3294
DNA (318bp) protein (106aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
ADP-ribose pyrophosphatase n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KZP4_9SYNC
NUDIX hydrolase
sw_6_scaffold_646_4
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3704..5266)
DNA (1563bp) protein (521aa)
Mg chelatase-like protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0U0_9BACT
ATPase with chaperone activity; K07391 magnesium chelatase family protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
Mg chelatase subunit ChlI
sw_6_scaffold_646_5
unknown

Not on your lists

5353..6168
DNA (816bp) protein (272aa)

This feature has no annotations

sw_6_scaffold_646_6
GWD1_OD1_35_49, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6330..7079)
DNA (750bp) protein (250aa)
transcriptional regulator TrmB id=5803151 bin=OD1_GWC2_34_28 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Transcriptional regulator TrmB {ECO:0000313|EMBL:KKP79220.1}; TaxID=1618631 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWD1_35_49.;"
transcriptional regulator TrmB
sw_6_scaffold_646_7
unknown

Not on your lists

7204..7872
DNA (669bp) protein (223aa)

This feature has no annotations

sw_6_scaffold_646_8
unknown

Not on your lists

8114..8512
DNA (399bp) protein (133aa)

This feature has no annotations

sw_6_scaffold_646_9
unknown

Not on your lists

8499..8720
DNA (222bp) protein (74aa)

This feature has no annotations

sw_6_scaffold_646_10
GWF2_OD1_35_39, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8853..10358)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DYB0_9BACT
Carboxypeptidase Taq {ECO:0000313|EMBL:KKP80364.1}; TaxID=1618721 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_35_39.;"
carboxypeptidase
sw_6_scaffold_646_11
R_RIF_OD1_10_43_60, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(10399..11613)
DNA (1215bp) protein (405aa)
peptidase M29 aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_43_60_curated
Thermophilic metalloprotease (M29) superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT
Thermophilic metalloprotease (M29) superfamily
sw_6_scaffold_646_12
R_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(11646..12050)
DNA (405bp) protein (135aa)
DnaK suppressor protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_10_44_12b_curated
TraR/DksA family transcriptional regulator id=5803180 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_646_13
unknown

Not on your lists

12223..12516
DNA (294bp) protein (98aa)

This feature has no annotations

sw_6_scaffold_646_14
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(12538..13044)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR52385.1}; TaxID=1618946 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_40_20.;"
hypothetical protein id=5803172 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
sw_6_scaffold_646_15
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


comp(13109..13429)
DNA (321bp) protein (107aa)
30S ribosomal protein S15 Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_55_17_curated
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=5803171 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsO; 30S ribosomal protein S15
sw_6_scaffold_646_16
GWA2_OD1_42_41_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13897..15402)
DNA (1506bp) protein (502aa)
PolyA polymerase {ECO:0000313|EMBL:KKS59358.1}; TaxID=1618737 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_42_41.;"
polynucleotide adenylyltransferase id=5803166 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polyA polymerase
sw_6_scaffold_646_trna_1
unknown

Not on your lists

15467..15540
DNA (74bp)
transferRNA
sw_6_scaffold_646_17
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

15736..16011
DNA (276bp) protein (92aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003619595
sw_6_scaffold_646_18
unknown

Not on your lists

16264..16470
DNA (207bp) protein (69aa)

This feature has no annotations

sw_6_scaffold_646_trna_4
unknown

Not on your lists

comp(16385..16455)
DNA (71bp)
transferRNA
sw_6_scaffold_646_19

Not on your lists

comp(16471..16770)
DNA (300bp) protein (100aa)
Prevent-host-death family protein, RelB-domain-containing protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FXT4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKK68513.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_6_scaffold_646_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16790..17182)
DNA (393bp) protein (131aa)
PilT protein, N-terminal n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4P1_SALRM
PilT protein, N-terminal
PilT protein, N-terminal {ECO:0000313|EMBL:CBH22996.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_6_scaffold_646_21
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria

Not on your lists

17520..17942
DNA (423bp) protein (141aa)
hypothetical protein; K07460 putative endonuclease id=5227369 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
UPF0102 protein O210_OD1C00001G0539 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1394712 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
hypothetical protein (UPF0102 domain)
sw_6_scaffold_646_trna_2
unknown

Not on your lists

18160..18233
DNA (74bp)
transferRNA
sw_6_scaffold_646_22
unknown

Not on your lists

18770..18874
DNA (105bp) protein (35aa)

This feature has no annotations

sw_6_scaffold_646_23
R_OD1_Kaiserbacteria_51_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

19013..19282
DNA (270bp) protein (90aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_OD1_Kaiserbacteria_51_13_curated
excinuclease ABC C subunit domain protein; K07461 putative endonuclease id=13294 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
GIY-YIG catalytic protein
sw_6_scaffold_646_trna_3
unknown

Not on your lists

19590..19660
DNA (71bp)
transferRNA
sw_6_scaffold_646_24
unknown

Not on your lists

19665..19817
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 28 items

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