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sw_6_scaffold_797

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_797_1
GWC1_OP11_46_15, Microgenomates, Bacteria

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1..1188
DNA (1188bp) protein (396aa)
Arginine--tRNA ligase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GJR9_CLOLD id=5087000 bin=GWF1_OP11_31_35_complete species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Arginine--tRNA ligase Tax=GWC1_OP11_46_15
argS; arginyl-tRNA synthetase
sw_6_scaffold_797_2
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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comp(1816..2217)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BS45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD68302.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
sw_6_scaffold_797_3
unknown

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comp(3589..4002)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_6_scaffold_797_4
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

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4498..5328
DNA (831bp) protein (277aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5) Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5803283 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
sw_6_scaffold_797_5
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

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5970..7844
DNA (1875bp) protein (625aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
transmembrane_regions id=5803285 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_797_6
R_OD1_Kaiserbacteria_59_21, Kaiserbacteria, Parcubacteria, Bacteria

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7875..8939
DNA (1065bp) protein (355aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_59_21_curated
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
sw_6_scaffold_797_7
RHI_OD1_Adlerbacteria_53_18, Adlerbacteria, Parcubacteria, Bacteria

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8946..10424
DNA (1479bp) protein (493aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPHIGHO2_12_FULL_OD1_Adlerbacteria_53_18_curated
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=6265 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
methionyl-tRNA synthetase
sw_6_scaffold_797_8
R_SM2F11_46_11, SM2F11, Bacteria

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comp(10796..11290)
DNA (495bp) protein (165aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
NUDIX hydrolase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AU24_PELPD
NUDIX hydrolase
sw_6_scaffold_797_9
unknown

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comp(11295..11429)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_6_scaffold_797_10
unknown

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comp(11642..12094)
DNA (453bp) protein (151aa)

This feature has no annotations

sw_6_scaffold_797_11

Not on your lists

12447..13064
DNA (618bp) protein (206aa)
sec-independent protein translocase protein (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] id=5803293 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Hydrolase, TatD family {ECO:0000313|EMBL:KKS88823.1}; TaxID=1618907 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11.;"
hydrolase, TatD family
Displaying 11 items

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