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sw_6_scaffold_151_26

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(21748..22332)

Top 3 Functional Annotations

Value Algorithm Source
rplS; 50S ribosomal protein L19 Tax=RIFOXYB1_FULL_OD1_Kaiserbacteria_46_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 175.0
  • Bit_score: 158
  • Evalue 9.90e-36
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=5803271 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 175.0
  • Bit_score: 155
  • Evalue 4.60e-35
rplS; 50S ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 141.0
  • Bit_score: 97
  • Evalue 5.50e-18

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Notes

OD1? Kari Finstad (2/6/15)

Taxonomy

RIFOXYB1_FULL_OD1_Kaiserbacteria_46_14_curated → Kaiserbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGCTCCCACAAAAGATCAACAAAACGTAATTTCGCCGGTTGATGTCGGCAAGCGACAGGATATTGATATTCAGACCGGTGACACGGTTCGGGTTGTCGAGAAAGTCGATGATGGTGGCGGGGAGTACCGCCTTGAGCCGTTTGAAGGTATTGTGCTCGGTCGAAAACACGGTGATGAGCCGGGCGGAACCTTTACGGTTCGATCTGAGGTTGAGGGTGTTGGTGTCGAAAAGATCTTTCCGCTGTATTCTCCGCGTATTGATGAAATTAATATTGTTCGCCGCGCGCAAATGCGTCGCTCGAAACTGTATCATATCCGGGATAAGGCAGCTCGCCAGATTCGCCGGCAGATGCGCCGGATGGTTAATGTTGATATTTCTACGAAAACTGAGGGTGAAGAGAGTGGTGAAAATGAAGACACCGAAGAAGATGAAGATGCTGATAATGTTGACGAATCTGCCGACGATTCGCCAGAAGATAGCGCAGAAATAGAACAAGATGACTCCAGCCAAGAAAAATCTGACAGTGAAGATGAAAATTCTGATGAAGAGTCCGGCGATGAAGACAACGAGGTTAAAGAGTAA
PROTEIN sequence
Length: 195
MAPTKDQQNVISPVDVGKRQDIDIQTGDTVRVVEKVDDGGGEYRLEPFEGIVLGRKHGDEPGGTFTVRSEVEGVGVEKIFPLYSPRIDEINIVRRAQMRRSKLYHIRDKAARQIRRQMRRMVNVDISTKTEGEESGENEDTEEDEDADNVDESADDSPEDSAEIEQDDSSQEKSDSEDENSDEESGDEDNEVKE*