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sw_6_scaffold_2218_11

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(6613..7251)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKS47393.1}; TaxID=1618659 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19. similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 148
  • Evalue 1.50e-32
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 169.0
  • Bit_score: 137
  • Evalue 1.90e-29
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 179.0
  • Bit_score: 79
  • Evalue 1.30e-12

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Taxonomy

GWF2_OD1_42_19 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGATAGCTTACTTTTGGTATTTTTTTAGGTGTAATTACCATTTGCGTGATGTTATATTTAAACTGCAAGGATTTTTAAGCTATGGGTGTAATATACAGCCGCTTATTTCGTCTTCGTACATGCAGTCACCAGATAAAGAACAATTTCTTCGCGCCTACGATCAGCATGCTGATGCCGTGTTTCGTCGGTGTCTGTTTAAAACATCGAATCGGGAAACTGCCCGTGACTTATCTCAGGAGGCCTGGATGAAAACCTGGGATTATCTTGCGGACGGAAAAGAAATCAATCATATTAAGGCATTCGTCTTTCGGGTTGCAAATAACCTCATAAAAGATTACTACAAAAAAAAGAAAGCGACGGCAATGGGAGCAATGTCTGATTTTGATCCGCAACGAATAGTTGATTCGCTGGAAAATATTGAAGCGAAGGCACGCACCAAAGAAGTTCTGCGGACCTTAGAAGACATGAAGCCGTCTGATCGGGACGTTCTAACACTCAGCATTGTCGAAGGGTTCGGGCCGAAAAAAATTGCGGAAATCAACGACAAGCGGGAAAATACCGTCGCCGTGCAGTTACACCGAGCTCGTAAGCGGCTACGAAAGCGTTTAAAAAATACCGAAAATGATGAGCAACTTTGA
PROTEIN sequence
Length: 213
MIAYFWYFFRCNYHLRDVIFKLQGFLSYGCNIQPLISSSYMQSPDKEQFLRAYDQHADAVFRRCLFKTSNRETARDLSQEAWMKTWDYLADGKEINHIKAFVFRVANNLIKDYYKKKKATAMGAMSDFDPQRIVDSLENIEAKARTKEVLRTLEDMKPSDRDVLTLSIVEGFGPKKIAEINDKRENTVAVQLHRARKRLRKRLKNTENDEQL*