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sw_6_scaffold_3250_4

Organism: SW_6_Parcubacteria_46_9

partial RP 44 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(2494..2877)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 128.0
  • Bit_score: 129
  • Evalue 3.20e-27
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5803080 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 128.0
  • Bit_score: 126
  • Evalue 2.60e-26
Two component transcriptional regulator, winged helix similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 115.0
  • Bit_score: 80
  • Evalue 4.50e-13

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Taxonomy

R_OD1_Campbellbacteria_34_15 → Campbellbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGTCGGAAGATAACAAACCGGAAAATATACTGCTTGTTGACGATGACGAATTTATTCGGGATATTTACTCAACTAAATTTTCCGAATCGGGAATTGACGTCACACCAGCAGAAAACGGCACAGCGGCTCTTGCGATGTTGGCAGAAAAAGACTTTGATGTTGTTCTTGTAGACATGATTATGCCGGAAATGGACGGTGCTAAGTTTCTTGAGCAGTTTTATGAAAACCATGATCAGGAAAGTGTGGTTATCATTCTCAGCAACCAAGGGCAGCCGGAGGATGTTGATAAAGCACAAGTATTCGATATCGATGGGTATATAATAAAGGCTAACAACGTACCGTCAGAGGTTCTCCACGAGATTACTCGTATTTACAATCAATAA
PROTEIN sequence
Length: 128
MSEDNKPENILLVDDDEFIRDIYSTKFSESGIDVTPAENGTAALAMLAEKDFDVVLVDMIMPEMDGAKFLEQFYENHDQESVVIILSNQGQPEDVDKAQVFDIDGYIIKANNVPSEVLHEITRIYNQ*