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sw_6_scaffold_3250

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3250_1
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(212..1423)
DNA (1212bp) protein (404aa)
hypothetical protein Tax=GWA1_OD1_40_21
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system F domain protein
sw_6_scaffold_3250_2
R_OD1_Kaiserbacteria_54_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1441..2310)
DNA (870bp) protein (290aa)
pilT; type IV pilus assembly protein PilT Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_13_curated
twitching motility protein; K02669 twitching motility protein PilT id=5803079 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
twitching motility protein
sw_6_scaffold_3250_3
unknown

Not on your lists

comp(2307..2492)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_6_scaffold_3250_4
R_OD1_Campbellbacteria_34_15, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2494..2877)
DNA (384bp) protein (128aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5803080 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Two component transcriptional regulator, winged helix
sw_6_scaffold_3250_5
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2890..4608)
DNA (1719bp) protein (573aa)
putative type II secretion system protein E Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
sw_6_scaffold_3250_6
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4635..5114)
DNA (480bp) protein (160aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
sw_6_scaffold_3250_7
R_OD1_Kaiserbacteria_48_10, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5111..5701)
DNA (591bp) protein (197aa)
no description Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_48_10_curated
no description id=5803083 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Displaying 7 items

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