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sw_6_scaffold_1152

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1152_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..240)
DNA (240bp) protein (80aa)
rps19; 30S ribosomal protein S19 id=24646815 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps19p; 30S ribosomal protein S19P
sw_6_scaffold_1152_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(242..1006)
DNA (765bp) protein (255aa)
50S ribosomal protein L2P n=1 Tax=Halomicrobium katesii RepID=UPI00036F1B22
50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
sw_6_scaffold_1152_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1010..1264)
DNA (255bp) protein (85aa)
50S ribosomal protein L23P n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZV4_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
50S ribosomal protein L23
sw_6_scaffold_1152_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1261..2007)
DNA (747bp) protein (249aa)
50S ribosomal protein L4 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZV5_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
rpl4lp; 50S ribosomal protein L4
sw_6_scaffold_1152_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2011..3027)
DNA (1017bp) protein (339aa)
50S ribosomal protein L3 n=2 Tax=Haladaptatus paucihalophilus RepID=E7QZV6_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
rplC; 50S ribosomal protein L3P
sw_6_scaffold_1152_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3032..3925)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZV7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89851.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1152_trna_1
unknown

Not on your lists

4136..4206
DNA (71bp)
transferRNA
sw_6_scaffold_1152_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4268..6337)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KB54_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA18612.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
type II secretion system, protein F
sw_6_scaffold_1152_8
unknown

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6451..6774
DNA (324bp) protein (108aa)

This feature has no annotations

sw_6_scaffold_1152_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(6837..7541)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAU9_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
sw_6_scaffold_1152_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8016..8915)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WC67_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46876.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_6_scaffold_1152_11
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8912..9907)
DNA (996bp) protein (332aa)
ABC transporter related protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RV12_HALTV
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB59305.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halo
sw_6_scaffold_1152_12
unknown

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10100..10297
DNA (198bp) protein (66aa)

This feature has no annotations

sw_6_scaffold_1152_13
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10347..16259)
DNA (5913bp) protein (1971aa)
Peptidase S8 and S53 subtilisin kexin sedolisin (Fragment) n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E8E7_9EURY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ELZ42649.1}; Flags: Fragment;; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
peptidase S8 and S53 subtilisin kexin sedolisin rbh
sw_6_scaffold_1152_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16425..16694
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZV9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89853.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1152_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16752..17699)
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase-like protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHQ3_9EURY
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:AHG03230.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
methionyl-tRNA formyltransferase
sw_6_scaffold_1152_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17692..18750)
DNA (1059bp) protein (353aa)
Polysaccharide deacetylase n=1 Tax=Halobacterium sp. DL1 RepID=G4IHQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05205.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Polysaccharide deacetylase
sw_6_scaffold_1152_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19149..20081
DNA (933bp) protein (311aa)
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WA57_9EURY
sw_6_scaffold_1152_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20111..20626
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EVJ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58652.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_1152_19
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20663..22366)
DNA (1704bp) protein (568aa)
kinA3; signal-transducing histidine kinase-like protein (EC:2.7.3.-)
HTR-like protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NX30_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA61829.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
sw_6_scaffold_1152_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22580..23368)
DNA (789bp) protein (263aa)
Htr-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR20_9EURY
Htr-like protein {ECO:0000313|EMBL:EFW93434.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
RecA-superfamily ATPase possibly involved in signal transduction
sw_6_scaffold_1152_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23970..24593
DNA (624bp) protein (208aa)
Membrane protease regulatory membrane protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZJ26_9EURY
Membrane protease regulatory membrane protein {ECO:0000313|EMBL:EJN60700.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B
hypothetical protein
sw_6_scaffold_1152_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24687..25841
DNA (1155bp) protein (385aa)
Band 7 protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QTH9_9EURY
Band 7 protein {ECO:0000313|EMBL:EFW91908.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.
hypothetical protein
sw_6_scaffold_1152_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26860..27666
DNA (807bp) protein (269aa)
UDP-glucose 4-epimerase n=1 Tax=Halogranum salarium B-1 RepID=J3JFV7_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EJN59589.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
galE8; UDP-glucose 4-epimerase
sw_6_scaffold_1152_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27864..28106)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91905.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1152_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29035..30456
DNA (1422bp) protein (474aa)
Glycosyl transferase family 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTH5_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFW91904.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
glycosyl transferase
sw_6_scaffold_1152_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30822..31385
DNA (564bp) protein (188aa)
Acetyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2P5_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA38884.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
GCN5-related N-acetyltransferase
sw_6_scaffold_1152_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31422..31982)
DNA (561bp) protein (187aa)
Probable non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteria
Probable non-canonical purine NTP phosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTH4_9EURY
hypothetical protein
sw_6_scaffold_1152_28
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32352..33005)
DNA (654bp) protein (218aa)
Iron/cobalamin ABC transporter periplasmic substrate-binding protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EPA6_9EURY
Iron/cobalamin ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:ELZ48249.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
Fe3+-hydroxamate ABC transporter substrate-binding protein
sw_6_scaffold_1152_29
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33268..33624
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Thioalkalivibrio RepID=B8GUK4_THISH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73324.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
Displaying 30 items

View Taxonomy