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sw_6_scaffold_1302

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1302_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(115..1155)
DNA (1041bp) protein (347aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2L5_HALJB
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
sw_6_scaffold_1302_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1524..1790
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=2 Tax=Haladaptatus paucihalophilus RepID=E7QS85_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=797209
elongation factor 1-beta
sw_6_scaffold_1302_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2187..2816)
DNA (630bp) protein (210aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X9W9_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELY58534.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Na
lactoylglutathione lyase-like lyase
sw_6_scaffold_1302_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2922..3590)
DNA (669bp) protein (223aa)
Beta-lactamase domain protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WVW1_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:ELY53537.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
beta-lactamase domain-containing protein
sw_6_scaffold_1302_5
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3665..3988)
DNA (324bp) protein (108aa)
hypothetical protein id=24619014 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH07628.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_6_scaffold_1302_6
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3985..4257)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1PC59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH07629.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_6_scaffold_1302_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4347..5207)
DNA (861bp) protein (287aa)
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase {ECO:0000313|EMBL:ADB61264.1}; EC=4.4.1.1 {ECO:0000313|EMBL:ADB61264.1};; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrige
Cystathionine gamma-lyase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RV63_HALTV
sw_6_scaffold_1302_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5704..6000)
DNA (297bp) protein (99aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY29_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA50627.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
sw_6_scaffold_1302_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6118..6408
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS81_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus
50S ribosomal protein L21e
sw_6_scaffold_1302_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6410..6766
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS80_9EURY
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EFW92849.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
sw_6_scaffold_1302_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6862..7437
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25450.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1302_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7855..8748
DNA (894bp) protein (298aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CU99_9EURY
ksgA; dimethyladenosine transferase
sw_6_scaffold_1302_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8745..9884
DNA (1140bp) protein (380aa)
MscS Mechanosensitive ion channel n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS77_9EURY
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EFW92846.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
mechanosensitive ion channel MscS
sw_6_scaffold_1302_14
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9881..10483
DNA (603bp) protein (201aa)
Methyltransferase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AV44_NATA1
Methyltransferase {ECO:0000313|EMBL:ELZ02420.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 700177 / D
methylase
sw_6_scaffold_1302_15
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10632..11645
DNA (1014bp) protein (338aa)
Cobalamin-independent synthase MetE domain-containing protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WJ03_9EURY
Cobalamin-independent synthase MetE domain-containing protein {ECO:0000313|EMBL:ELY48328.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;"
Cobalamin-independent synthase MetE domain-containing protein
sw_6_scaffold_1302_16
unknown

Not on your lists

comp(11965..12093)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_6_scaffold_1302_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12099..12647
DNA (549bp) protein (183aa)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; TaxID=751944 species="Archaea; E
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBG8_9EURY
sw_6_scaffold_1302_18
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13452..14021
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4II88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05184.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_6_scaffold_1302_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14044..14361)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36458.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_1302_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14358..14813)
DNA (456bp) protein (152aa)
Peptidase S45 penicillin amidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS57_9EURY
Peptidase S45 penicillin amidase {ECO:0000313|EMBL:EFW92826.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauc
penicilin amidase
Displaying 20 items

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