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sw_6_scaffold_1622

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1622_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3..548)
DNA (546bp) protein (182aa)
Sulfatase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CB81_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ20521.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
sulfatase
sw_6_scaffold_1622_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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873..1352
DNA (480bp) protein (160aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D557_HALXS
bacterio-opsin activator
Bacterio-opsin activator {ECO:0000313|EMBL:AHF99878.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48
sw_6_scaffold_1622_3
unknown

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1398..1832
DNA (435bp) protein (145aa)

This feature has no annotations

sw_6_scaffold_1622_4
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1882..2124
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XJK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY61772.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_6_scaffold_1622_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2152..3054)
DNA (903bp) protein (301aa)
Phosphomethylpyrimidine kinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU13_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EFW92092.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
phosphomethylpyrimidine kinase
sw_6_scaffold_1622_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3051..3668)
DNA (618bp) protein (206aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Probable deoxycytidine triphosphate deaminase {ECO:0000255|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000255|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000255|HAMAP-Rule:MF_00146};; TaxID=348780 s
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DCD_NATPD
sw_6_scaffold_1622_7
GWA2_OD1_52_8b, Uhrbacteria, Parcubacteria, Bacteria

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comp(3738..4778)
DNA (1041bp) protein (347aa)
Pyruvate kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D051_PELTS
Pyruvate kinase {ECO:0000313|EMBL:KKW31374.1}; TaxID=1618979 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWA2_52_8d.;"
PykF; pyruvate kinase
sw_6_scaffold_1622_8
unknown

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comp(4843..5601)
DNA (759bp) protein (253aa)

This feature has no annotations

sw_6_scaffold_1622_9
unknown

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comp(5598..6062)
DNA (465bp) protein (155aa)

This feature has no annotations

sw_6_scaffold_1622_10
Bacillus mycoides, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6081..6740)
DNA (660bp) protein (220aa)
Hypothetical cytosolic protein n=1 Tax=Lactobacillus helveticus (strain H10) RepID=F0NTH9_LACHH
Uncharacterized protein {ECO:0000313|EMBL:KFM98540.1}; TaxID=1405 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus mycoides.;"
hypothetical protein
sw_6_scaffold_1622_11
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6867..7205
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628, ECO:0000313|EMBL:ELZ74734.1}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628, ECO:0000313|EMBL:ELZ
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GV41_9EURY
sw_6_scaffold_1622_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7698..9038
DNA (1341bp) protein (447aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU19_9EURY
tRNA pseudouridine synthase D
sw_6_scaffold_1622_13
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9635..9976
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CQ06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25345.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_6_scaffold_1622_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10090..10569
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20225.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 14 items

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