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sw_6_scaffold_1995

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1995_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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216..470
DNA (255bp) protein (85aa)
Translation initiation factor 1A n=1 Tax=Halogranum salarium B-1 RepID=J3EY97_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
translation initiation factor aIF-1A
sw_6_scaffold_1995_trna_1
unknown

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comp(636..707)
DNA (72bp)
transferRNA
sw_6_scaffold_1995_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1266..1724
DNA (459bp) protein (153aa)
30S ribosomal protein S15 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2FFX0_9EURY
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
30S ribosomal protein S15
sw_6_scaffold_1995_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1731..2963
DNA (1233bp) protein (411aa)
Putative exonuclease Recj n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUK5_9EURY
Putative exonuclease Recj {ECO:0000313|EMBL:EFW91662.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihaloph
hypothetical protein
sw_6_scaffold_1995_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2960..3253
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91663.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1995_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3250..3885
DNA (636bp) protein (212aa)
30S ribosomal protein S3Ae n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W1X4_9EURY
30S ribosomal protein S3Ae rbh
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1333523 species="Archaea; Euryarchaeota; Hal
sw_6_scaffold_1995_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3710..4294)
DNA (585bp) protein (195aa)
Blue (Type 1) copper domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUK8_9EURY
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:EFW91665.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
blue (type 1) copper domain-containing protein
sw_6_scaffold_1995_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4525..5328
DNA (804bp) protein (268aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-alcohol phosphatidyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFD7_9EURY
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AHG03603.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" sour
sw_6_scaffold_1995_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5386..6696
DNA (1311bp) protein (437aa)
PBS lyase HEAT-like repeat domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUL5_9EURY
PBS lyase HEAT-like repeat domain protein {ECO:0000313|EMBL:EFW91672.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
PBS lyase HEAT-like repeat domain-containing protein
sw_6_scaffold_1995_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6831..6986
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUL4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91671.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_1995_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6975..7244)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91670.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_1995_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7297..9048
DNA (1752bp) protein (584aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJN3_9EURY
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:EMA45881.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
phospholipase D
sw_6_scaffold_1995_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9081..10826)
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QUL1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91668.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
RecJ-like exonuclease with DnaJ-type Zn-finger domain
sw_6_scaffold_1995_13
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11098..11415
DNA (318bp) protein (106aa)
IS1341-type transposase (TCE31) n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W1S9_9EURY
IS1341-type transposase (TCE31) {ECO:0000313|EMBL:ELY43246.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
transposase, IS605 OrfB family, central region
sw_6_scaffold_1995_14
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11476..11922
DNA (447bp) protein (149aa)
IS1341-type transposase (TCE31) n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W1S9_9EURY
IS1341-type transposase (TCE31) {ECO:0000313|EMBL:ELY43246.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
transposase, IS605 OrfB family, central region
sw_6_scaffold_1995_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12219..12842
DNA (624bp) protein (208aa)
Metal-dependent protease of the PAD1/JAB1 superfamily-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUL0_9EURY
Metal-dependent protease of the PAD1/JAB1 superfamily-like protein {ECO:0000313|EMBL:EFW91667.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladap
proteasome Rpn11 subunit JAMM motif protein
sw_6_scaffold_1995_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12868..13296
DNA (429bp) protein (143aa)
FAD synthase {ECO:0000256|HAMAP-Rule:MF_02115, ECO:0000256|SAAS:SAAS00008287}; EC=2.7.7.2 {ECO:0000256|HAMAP-Rule:MF_02115, ECO:0000256|SAAS:SAAS00008290};; FMN adenylyltransferase {ECO:0000256|HAMAP-
FAD synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUK9_9EURY
taqD; glycerol-3-phosphate cytidyltransferase-like protein
sw_6_scaffold_1995_17
unknown

Not on your lists

comp(13111..13614)
DNA (504bp) protein (168aa)

This feature has no annotations

sw_6_scaffold_1995_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14661..15815)
DNA (1155bp) protein (385aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS90_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFW92859.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;"
NADH dehydrogenase
sw_6_scaffold_1995_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16135..16668)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUT0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91737.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
transcriptional regulator
sw_6_scaffold_1995_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16814..17734
DNA (921bp) protein (307aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M909_HALMO
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA42277.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrh
NAD-dependent epimerase/dehydratase
sw_6_scaffold_1995_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17775..18698
DNA (924bp) protein (308aa)
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUS9_9EURY
Arginase {ECO:0000313|EMBL:EFW91736.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
sw_6_scaffold_1995_22
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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19283..19753
DNA (471bp) protein (157aa)
HAD-superfamily hydrolase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AHL6_NATA1
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELY98019.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 70
HAD-superfamily hydrolase
sw_6_scaffold_1995_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19757..20920)
DNA (1164bp) protein (388aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
DNA gyrase subunit alpha (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPJ9_9EURY
sw_6_scaffold_1995_24
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21274..21678
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SFU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52615.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
sw_6_scaffold_1995_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22162..22800)
DNA (639bp) protein (213aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=797209 species="Archaea; Eur
DNA gyrase subunit b (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Haladaptatus paucihalophilus RepID=E7QUS7_9EURY
Displaying 26 items

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