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sw_6_scaffold_2222

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_2222_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..551)
DNA (549bp) protein (183aa)
Cell surface glycoprotein related protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ41_9EURY
Cell surface glycoprotein related protein {ECO:0000313|EMBL:EMA45368.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
hypothetical protein
sw_6_scaffold_2222_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

846..1700
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93106.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_2222_3

Not on your lists

1849..3150
DNA (1302bp) protein (434aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=halophilic archaeon DL31 RepID=G2MNW7_9ARCH
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEN07558.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_2222_4
unknown

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comp(2967..3737)
DNA (771bp) protein (257aa)

This feature has no annotations

sw_6_scaffold_2222_trna_1
unknown

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4100..4185
DNA (86bp)
transferRNA
sw_6_scaffold_2222_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4744..5736)
DNA (993bp) protein (331aa)
Polysaccharide deacetylase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ53_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:EFW93117.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalop
xylanase/chitin deacetylase
sw_6_scaffold_2222_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5814..6413)
DNA (600bp) protein (200aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ52_9EURY
sw_6_scaffold_2222_7
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6689..7354
DNA (666bp) protein (222aa)
hypothetical protein
Uncharacterized protein id=24578647 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein {ECO:0000313|EMBL:AKA27538.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloro
sw_6_scaffold_2222_8
unknown

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7351..7617
DNA (267bp) protein (89aa)

This feature has no annotations

sw_6_scaffold_2222_9
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7986..9182
DNA (1197bp) protein (399aa)
glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
Glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:AEH37695.1}; EC=2.3.1.157 {ECO:0000313|EMBL:AEH37695.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5W9_HALXS
sw_6_scaffold_2222_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9293..9703)
DNA (411bp) protein (137aa)
Purine-binding chemotaxis protein CheW n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ51_9EURY
Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:EFW93115.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatu
cheW; purine-binding taxis protein
sw_6_scaffold_2222_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9814..10152
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93114.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_2222_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10203..10421
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ49_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93113.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_2222_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10640..11185
DNA (546bp) protein (182aa)
Flagellin A2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ48_9EURY
Flagellin {ECO:0000256|RuleBase:RU361282}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
flgA2; flagellin A2
sw_6_scaffold_2222_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11273..12493
DNA (1221bp) protein (407aa)
Che operon protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ46_9EURY
Che operon protein {ECO:0000313|EMBL:EFW93110.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX
che operon protein, phycocyanin alpha phycocyanobilin lyase-like
sw_6_scaffold_2222_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12645..14579
DNA (1935bp) protein (645aa)
Transducer protein htr15 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ45_9EURY
Transducer protein htr15 {ECO:0000313|EMBL:EFW93109.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
htr15; transducer protein htr15
sw_6_scaffold_2222_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14707..15507
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ44_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93108.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_2222_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15696..16850)
DNA (1155bp) protein (385aa)
IS1341-type transposase (TCE31) n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LES8_9EURY
IS1341-type transposase (TCE31) {ECO:0000313|EMBL:EMA31603.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5
IS1341-type transposase (TCE31)
sw_6_scaffold_2222_18
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16854..17243)
DNA (390bp) protein (130aa)
IS200-type transposase (TCE31) n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LGR5_9EURY
IS200-type transposase (TCE31) {ECO:0000313|EMBL:EMA31604.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
IS200-type transposase (TCE31)
sw_6_scaffold_2222_19
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17593..18846)
DNA (1254bp) protein (418aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P633_9EURY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EMA64305.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
subtilisin-like serine protease
sw_6_scaffold_2222_20
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19006..19242)
DNA (237bp) protein (79aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ55_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY54557.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyl
nucleoside-diphosphate-sugar epimerase
sw_6_scaffold_2222_21
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19203..19940)
DNA (738bp) protein (246aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Natronococcus occultus SP4 RepID=L0K2N9_9EURY
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGB38795.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" sourc
sw_6_scaffold_2222_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20047..20556)
DNA (510bp) protein (170aa)
Polysaccharide biosynthesis protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ57_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFW93121.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
membrane protein involved in the export of O-antigen and teichoic acid
Displaying 23 items

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