ggKbase home page

sw_6_scaffold_5281

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_5281_1
unknown

Not on your lists

comp(37..132)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_6_scaffold_5281_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(226..864)
DNA (639bp) protein (213aa)
Phosphoserine phosphatase SerB n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LJR7_9EURY
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EMA33776.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
phosphoserine phosphatase
sw_6_scaffold_5281_3
unknown

Not on your lists

980..1333
DNA (354bp) protein (118aa)

This feature has no annotations

sw_6_scaffold_5281_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1434..1700
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F599_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ54417.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_6_scaffold_5281_5
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1697..2086
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NZE5_9EURY
putative nucleic acid-binding protein, contains PIN domain
sw_6_scaffold_5281_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2112..2375)
DNA (264bp) protein (88aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=797209 species="Archaea;
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNR9_9EURY
sw_6_scaffold_5281_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2428..2838
DNA (411bp) protein (137aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1R6_9EURY
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
sw_6_scaffold_5281_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3113..3700
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=485914 species="Archaea;
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0L2_HALMD
sw_6_scaffold_5281_9
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3716..4558)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IIX8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96715.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
sw_6_scaffold_5281_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4796..5218
DNA (423bp) protein (141aa)
Putative repressor of tryptophan metabolism TrpY n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNS1_9EURY
Putative repressor of tryptophan metabolism TrpY {ECO:0000313|EMBL:EFW93574.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="H
putative regulator of amino acid metabolism, contains ACT domain
sw_6_scaffold_5281_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5220..5684)
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y4S2_THEBD
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AHY46196.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source=
sw_6_scaffold_5281_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5708..6478
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RTG9_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59012.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
Displaying 12 items

View Taxonomy