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sw_6_scaffold_939

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_939_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(219..1148)
DNA (930bp) protein (310aa)
Signal recognition particle 54 kDa protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN16_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Signal recognition 54 kDa protein
sw_6_scaffold_939_2
unknown

Not on your lists

2302..2565
DNA (264bp) protein (88aa)

This feature has no annotations

sw_6_scaffold_939_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2604..3740)
DNA (1137bp) protein (379aa)
Signal recognition particle receptor FtsY n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN09_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobact
signal recognition particle-docking protein FtsY
sw_6_scaffold_939_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3747..4211)
DNA (465bp) protein (155aa)
Prefoldin subunit alpha n=2 Tax=Haladaptatus paucihalophilus RepID=E7QN10_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
prefoldin subunit alpha/subunit 5
sw_6_scaffold_939_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4208..4384)
DNA (177bp) protein (59aa)
50S ribosomal protein L18Ae n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VWC3_9EURY
rplX; 50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=1333523 s
sw_6_scaffold_939_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4445..4867)
DNA (423bp) protein (141aa)
Protein tyrosine phosphatase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7F8_HALXS
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:AEH37879.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_6_scaffold_939_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4854..5735)
DNA (882bp) protein (294aa)
Arsenical-resistance protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAP5_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:EMA53730.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
arsB; Arsenite resistance protein ArsB
sw_6_scaffold_939_8
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5805..6200)
DNA (396bp) protein (132aa)
ArsR family transcriptional regulator n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BMQ7_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ12176.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus
transcriptional regulator
sw_6_scaffold_939_9
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6299..6994)
DNA (696bp) protein (232aa)
Translation initiation factor 6 n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AHV3_NATGS
translation initiation factor eIF-6
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbac
sw_6_scaffold_939_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6999..7277)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8T8_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
ribosomal protein L31e
sw_6_scaffold_939_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7277..7429)
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M546_9EURY
rpl39e; 50S ribosomal protein L39e
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
sw_6_scaffold_939_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7527..7919)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTF3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91882.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_939_13
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7985..8539)
DNA (555bp) protein (185aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1230457 species="A
2'-5' RNA ligase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C9N2_9EURY
2'-5' RNA ligase
sw_6_scaffold_939_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8675..9484
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036086BF
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACV47362.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
sw_6_scaffold_939_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9507..9797
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMZ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93792.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_939_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9800..10018)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93791.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_939_17
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10153..10869)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XFZ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY60659.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase CobT
sw_6_scaffold_939_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11127..12371
DNA (1245bp) protein (415aa)
Cysteine desulfurase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMZ5_9EURY
Cysteine desulfurase {ECO:0000313|EMBL:EFW93790.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
cysteine desulfurase-like protein, SufS subfamily
sw_6_scaffold_939_19
unknown

Not on your lists

12471..12587
DNA (117bp) protein (39aa)

This feature has no annotations

sw_6_scaffold_939_20
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12627..13253
DNA (627bp) protein (209aa)
Metal dependent phosphohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMZ3_9EURY
Metal-dependent phosphohydrolase HD sub domain protein {ECO:0000313|EMBL:ELY59454.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source=
metal-dependent phosphohydrolase HD sub domain protein
sw_6_scaffold_939_21
unknown

Not on your lists

13303..13749
DNA (447bp) protein (149aa)

This feature has no annotations

sw_6_scaffold_939_22
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14071..14382
DNA (312bp) protein (104aa)
NifU family SUF system FeS assembly protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C707_9EURY
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:ELZ19031.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrig
SUF system FeS assembly protein, NifU family
sw_6_scaffold_939_23
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14430..14573)
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY58993.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
Displaying 23 items

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