ggKbase home page

sw_6_scaffold_1103_12

Organism: SW_6_Halobacteriales_65_15

near complete RP 21 / 55 MC: 1 BSCG 16 / 51 MC: 3 ASCG 35 / 38 MC: 2
Location: 8902..9612

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8F9_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 236.0
  • Bit_score: 418
  • Evalue 3.50e-114
transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 236.0
  • Bit_score: 418
  • Evalue 1.00e-114
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 236.0
  • Bit_score: 418
  • Evalue 5.00e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halalkalicoccus jeotgali → Halalkalicoccus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 711
ATGCACGACAAGGGACTGACCACGTCCATCGACTGGAAGGACAAGGACGCCTACGGTAACTCGCTCTCCTCGGAGAAGCGGACGCAGATGCACCGCCTGCGCAAGTGGCAGAAGCGGCTCCGCACCAAGGACGCGGGCGAGCGCAACCTCCAGTTCGCGCTCGGGGAAATCGACCGCATGGCTTCGGCACTCGGCGTCCCGCGGTCGGTCCGGGAGGTCGCGTGCGTCATCTACCGCCGGGCGCTGAACGAGGACATGATCCGCGGGCGCTCCATCGAGGGGACCTCGACCGCCGCGCTGTACGCCGCCTGTCGGAAGGAGGGCATCCCGCGGAGTCTGGAGGAGGTCGCCGAGGTGTCCCGGGTCGAGCGCAAGGAGATCGGCCGGACGTATCGCTACCTCTCGCAGGAACTCGGTCTGGAGATGCAACCCGTCGATCCGAAGCAGTACGTGCCCCGCTTTTGCTCGGAGATCGGCCTCTCGGAGGAGGTGGAGGCCAAGACGAACGAGATCATCGAGGTCACCGTCGAGCAGGGGTTACTGTCGGGCAAGTCGCCGACGGGCTACGCCGCCGCGGCCATCTACGCCGCCTCGCTGCTCTGCAACGAGAAGAAGACCCAGCGTGAAGTCGCCGAGGCCGCGCAGGTGACGGAGGTCACCATCCGGAACCGGTATCAGGAGCAAATCGAGGCGATGGGACTTCACGAGTAG
PROTEIN sequence
Length: 237
MHDKGLTTSIDWKDKDAYGNSLSSEKRTQMHRLRKWQKRLRTKDAGERNLQFALGEIDRMASALGVPRSVREVACVIYRRALNEDMIRGRSIEGTSTAALYAACRKEGIPRSLEEVAEVSRVERKEIGRTYRYLSQELGLEMQPVDPKQYVPRFCSEIGLSEEVEAKTNEIIEVTVEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVAEAAQVTEVTIRNRYQEQIEAMGLHE*