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sw_6_scaffold_1103

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1103_1
unknown

Not on your lists

1..75
DNA (75bp) protein (25aa)

This feature has no annotations

sw_6_scaffold_1103_2
unknown

Not on your lists

154..759
DNA (606bp) protein (202aa)

This feature has no annotations

sw_6_scaffold_1103_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1088..2431
DNA (1344bp) protein (448aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D849_HALXS
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEH37942.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xan
sw_6_scaffold_1103_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2428..3414
DNA (987bp) protein (329aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSB8_HALTV
sugar ABC transporter rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB60699.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrige
sw_6_scaffold_1103_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3434..4405
DNA (972bp) protein (324aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D851_HALXS
ABC transporter integral membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEH37944.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger x
sw_6_scaffold_1103_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4461..5690
DNA (1230bp) protein (410aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Carbohydrate ABC transporter ATP-binding protein, cut1 family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZD2_9EURY
Carbohydrate ABC transporter ATP-binding protein, cut1 family {ECO:0000313|EMBL:EMA50663.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
sw_6_scaffold_1103_7
unknown

Not on your lists

5823..6494
DNA (672bp) protein (224aa)

This feature has no annotations

sw_6_scaffold_1103_8
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6622..6933)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R4U7_HALS3
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAP13762.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strai
sw_6_scaffold_1103_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7066..7323)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92702.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1103_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7515..8033)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D7F2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ31421.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_6_scaffold_1103_11
unknown

Not on your lists

8489..8659
DNA (171bp) protein (57aa)

This feature has no annotations

sw_6_scaffold_1103_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8902..9612
DNA (711bp) protein (237aa)
Transcription initiation factor IIB n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8F9_HALJB
transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_6_scaffold_1103_13
unknown

Not on your lists

comp(9648..10031)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_6_scaffold_1103_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10186..10647)
DNA (462bp) protein (154aa)
Uncharacterized protein id=24613971 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89595.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_6_scaffold_1103_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10795..11778)
DNA (984bp) protein (328aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT5_9EURY
rad2; flap endonuclease-1
sw_6_scaffold_1103_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12386..13825)
DNA (1440bp) protein (480aa)
glycine/D-amino acid oxidase, deaminating id=24616105 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:ESP87932.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
FAD dependent oxidoreductase
sw_6_scaffold_1103_17
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14049..14252
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain-containing protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A1L9_9EURY
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:ELY92499.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba
cold-shock protein
sw_6_scaffold_1103_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14262..14834)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0P3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51527.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
N-acetyltransferase GCN5
sw_6_scaffold_1103_19
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15054..15542
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PA23_STRVR
Uncharacterized protein {ECO:0000313|EMBL:ELS52994.1}; TaxID=1160705 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue5
hypothetical protein
sw_6_scaffold_1103_20
unknown

Not on your lists

15497..15706
DNA (210bp) protein (70aa)

This feature has no annotations

sw_6_scaffold_1103_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15745..16317
DNA (573bp) protein (191aa)
Methyl transferase-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGD3_9EURY
Methyl transferase-like protein {ECO:0000313|EMBL:EMA44766.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
methyltransferase type 11
sw_6_scaffold_1103_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16633..17049
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N828_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53279.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Protein of unknown function (DUF3054)
sw_6_scaffold_1103_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17104..17745)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92710.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1103_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18051..18281
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92712.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1103_25
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18731..19729
DNA (999bp) protein (333aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12) rbh
Ornithine cyclodeaminase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ITH3_9EURY
Ornithine cyclodeaminase {ECO:0000313|EMBL:ELZ99357.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA
sw_6_scaffold_1103_26
unknown

Not on your lists

comp(19775..19882)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_6_scaffold_1103_27
unknown

Not on your lists

20040..20285
DNA (246bp) protein (82aa)

This feature has no annotations

sw_6_scaffold_1103_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20328..21335)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92717.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_1103_29
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21588..23510
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEE9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21625.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_6_scaffold_1103_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23507..25024
DNA (1518bp) protein (506aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG40_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05371.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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