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sw_6_scaffold_113

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_113_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..669
DNA (669bp) protein (223aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB4_SALRM
transporter, small conductance mechanosensitive ion channel (MscS) family
Transporter, small conductance mechanosensitive ion channel (MscS) family {ECO:0000313|EMBL:CBH24969.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_6_scaffold_113_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(871..1290)
DNA (420bp) protein (140aa)
hypothetical protein
hypothetical protein id=24659799 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45563.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_113_3
unknown

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comp(1326..1535)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_6_scaffold_113_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1655..2263)
DNA (609bp) protein (203aa)
surE; acid phosphatase SurE; K03787 5'-nucleotidase [EC:3.1.3.5] id=24659800 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=309807 spec
surE; acid phosphatase SurE
sw_6_scaffold_113_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2350..3048)
DNA (699bp) protein (233aa)
Tat pathway signal sequence domain-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH69_RHOM4
Tat pathway signal sequence domain-containing protein
Tat pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ACY49658.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_6_scaffold_113_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3071..4870)
DNA (1800bp) protein (600aa)
Choline dehydrogenase {ECO:0000313|EMBL:CBH25669.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CBH25669.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Choline dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB4_SALRM
beta; choline dehydrogenase
sw_6_scaffold_113_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5377..6210)
DNA (834bp) protein (278aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB7_SALRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
sw_6_scaffold_113_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6306..6905)
DNA (600bp) protein (200aa)
outer membrane lipoprotein
outer membrane lipoprotein id=24659802 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein (OmpH-like) {ECO:0000313|EMBL:ABC44759.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_6_scaffold_113_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6983..7615)
DNA (633bp) protein (211aa)
Outer membrane protein OmpH, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H4_SALRD
outer membrane protein OmpH
Outer membrane protein OmpH, putative {ECO:0000313|EMBL:ABC44454.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_6_scaffold_113_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7656..10193)
DNA (2538bp) protein (846aa)
Surface antigen (D15): Surface antigen variable number n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC0_SALRM
Surface antigen (D15): Surface antigen variable number {ECO:0000313|EMBL:CBH24975.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
Surface antigen
sw_6_scaffold_113_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10429..11253)
DNA (825bp) protein (275aa)
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=24659805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
uppS; undecaprenyl diphosphate synthase
sw_6_scaffold_113_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11476..12918)
DNA (1443bp) protein (481aa)
Membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=24659806 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
membrane-associated zinc metalloprotease
sw_6_scaffold_113_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12996..14198)
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC3_SALRM
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
sw_6_scaffold_113_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14353..16236
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_113_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16286..17566
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_113_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17627..18136
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24982.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_113_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18179..19087
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBH24983.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBH24983.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
dTDP-4-dehydrorhamnose reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC8_SALRM
rfbD; dTDP-4-dehydrorhamnose reductase
sw_6_scaffold_113_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19293..20570
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBH24984.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(
Serine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC9_SALRM
serS; seryl-tRNA synthetase
sw_6_scaffold_113_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20680..21771)
DNA (1092bp) protein (364aa)
Fructose-1,6-bisphosphatase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisph
Fructose-1,6-bisphosphatase class 1 2 n=2 Tax=Salinibacter ruber RepID=F16A2_SALRD
fbp; fructose-1,6-bisphosphatase
sw_6_scaffold_113_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22073..22207)
DNA (135bp) protein (45aa)
putP; Na+/proline symporter
putP; Na+/proline symporter id=24657946 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Na+/proline symporter {ECO:0000313|EMBL:CBH25155.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_6_scaffold_113_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22212..23411)
DNA (1200bp) protein (400aa)
hypothetical protein
hypothetical protein id=24657947 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25156.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_113_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23392..24213)
DNA (822bp) protein (274aa)
Glucosamine--fructose-6-phosphateaminotransferase {ECO:0000313|EMBL:CBH25157.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CBH25157.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Glucosamine--fructose-6-phosphateaminotransferase n=2 Tax=Salinibacter ruber RepID=D5HAV2_SALRM
glmS; glucosamine--fructose-6-phosphate aminotransferase
sw_6_scaffold_113_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24283..25272)
DNA (990bp) protein (330aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000313|EMBL:CBH25158.1}; EC=4.1.2.40 {ECO:0000313|EMBL:CBH25158.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Tagatose 1,6-diphosphate aldolase n=2 Tax=Salinibacter ruber RepID=D5HAV3_SALRM
lacD; Tagatose 1,6-diphosphate aldolase
sw_6_scaffold_113_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25673..25936)
DNA (264bp) protein (88aa)
hypothetical protein, partial n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003819B0B
twin-arginine translocation pathway signal Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
oxidoreductase
sw_6_scaffold_113_25
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(26080..27738)
DNA (1659bp) protein (553aa)
sulfatase n=1 Tax=Flexithrix dorotheae RepID=UPI000382D573
sulfatase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
sulfatase
Displaying 25 items

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