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sw_6_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_23_trna_1
unknown

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comp(509..581)
DNA (73bp)
transferRNA
sw_6_scaffold_23_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(651..1325)
DNA (675bp) protein (225aa)
DedA family protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S212_SALRD
dedA; DedA family protein
Putative DedA family protein {ECO:0000313|EMBL:CBH24772.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_6_scaffold_23_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1357..1830)
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Salinibacter ruber RepID=ISPF_SALRD
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
sw_6_scaffold_23_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1860..2612)
DNA (753bp) protein (251aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R9_SALRM
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
sw_6_scaffold_23_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2669..3718)
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Salinibacter ruber RepID=D5H9S0_SALRM
queuosine biosynthesis protein
sw_6_scaffold_23_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3869..4825)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S208_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45691.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4968..6686)
DNA (1719bp) protein (573aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CBH24777.1}; EC=6.3.5.- {ECO:0000313|EMBL:CBH24777.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9S2_SALRM
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A
sw_6_scaffold_23_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6766..7182)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SGY8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24779.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7243..8496)
DNA (1254bp) protein (418aa)
ylnA; anion permease
ylnA; anion permease; K03306 inorganic phosphate transporter, PiT family id=24659615 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Anion permease {ECO:0000313|EMBL:ABC46004.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_6_scaffold_23_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8785..10428)
DNA (1644bp) protein (548aa)
Peptide chain release factor 3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9S7_SALRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
prfC; peptide chain release factor 3
sw_6_scaffold_23_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10576..11052)
DNA (477bp) protein (159aa)
hypothetical protein id=24659617 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24783.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11049..11855)
DNA (807bp) protein (269aa)
Uncharacterized ACR, COG1434 family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S202_SALRD
hypothetical protein
Uncharacterized ACR, COG1434 family {ECO:0000313|EMBL:ABC44208.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_6_scaffold_23_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11961..13199)
DNA (1239bp) protein (413aa)
hypothetical protein
hypothetical protein id=24659620 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24787.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13548..15092
DNA (1545bp) protein (515aa)
Anthranilate synthase component I {ECO:0000313|EMBL:CBH24788.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBH24788.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Anthranilate synthase component I n=2 Tax=Salinibacter ruber RepID=D5H9T3_SALRM
trpE; anthranilate synthase
sw_6_scaffold_23_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15209..15691
DNA (483bp) protein (161aa)
hypothetical protein
hypothetical protein id=24659622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15742..16776
DNA (1035bp) protein (345aa)
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=24659623 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA synthetase
sw_6_scaffold_23_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

16808..17284
DNA (477bp) protein (159aa)
S23 ribosomal protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KK19_CYAP7
S23 ribosomal protein Tax=RBG_16_Chloroflexi_63_12_curated
S23 ribosomal protein
sw_6_scaffold_23_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17329..17931
DNA (603bp) protein (201aa)
Para-aminobenzoate synthase glutamine amidotransferase, component ii {ECO:0000313|EMBL:CBH24791.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CBH24791.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
Para-aminobenzoate synthase glutamine amidotransferase, component ii n=2 Tax=Salinibacter ruber RepID=D5H9T6_SALRM
pabA; para-aminobenzoate synthase glutamine amidotransferase component ii
sw_6_scaffold_23_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17970..19004
DNA (1035bp) protein (345aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=761659 spe
Anthranilate phosphoribosyltransferase n=2 Tax=Salinibacter ruber RepID=TRPD_SALRD
trpD; anthranilate phosphoribosyltransferase
sw_6_scaffold_23_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19275..20087
DNA (813bp) protein (271aa)
trpC; Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=24659626 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
trpC; Indole-3-glycerol phosphate synthase
sw_6_scaffold_23_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20325..20975
DNA (651bp) protein (217aa)
trpF; N-(5'phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=24659627 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
trpF; N-(5'phosphoribosyl)anthranilate isomerase
sw_6_scaffold_23_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21082..22302
DNA (1221bp) protein (407aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBH24795.1}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBH24795.1};; TaxID=761659 species="Bacter
Tryptophan synthase beta chain n=2 Tax=Salinibacter ruber RepID=D5H9U0_SALRM
trpB; tryptophan synthase subunit beta
sw_6_scaffold_23_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22416..23264
DNA (849bp) protein (283aa)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Tryptophan synthase alpha chain n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRPA_SALRD
trpA; tryptophan synthase subunit alpha
sw_6_scaffold_23_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23452..24609
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9U2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24797.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24609..25046
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9U3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24798.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25199..27148)
DNA (1950bp) protein (650aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CBH24799.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH24799.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
ATP-dependent DNA helicase RecQ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9U4_SALRM
recQ; ATP-dependent DNA helicase RecQ
sw_6_scaffold_23_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27305..28339
DNA (1035bp) protein (345aa)
glycosyl transferase family protein
glycosyl transferase family protein; K07011 id=24659633 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45193.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_6_scaffold_23_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28464..29384)
DNA (921bp) protein (307aa)
hypothetical protein
hypothetical protein id=24659634 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Integral membrane protein DUF6 {ECO:0000313|EMBL:ABC45741.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_6_scaffold_23_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29409..29834)
DNA (426bp) protein (142aa)
hypothetical protein
hypothetical protein id=24659635 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24801.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_23_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29855..30877)
DNA (1023bp) protein (341aa)
Isocitrate dehydrogenase, NAD-dependent {ECO:0000313|EMBL:CBH24802.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CBH24802.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Isocitrate dehydrogenase, NAD-dependent n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9U7_SALRM
icd; NAD-dependent isocitrate dehydrogenase
Displaying items 1-30 of 40 in total

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