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sw_6_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_24_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(236..634)
DNA (399bp) protein (133aa)
bcp; peroxiredoxin
anti-oxidant AhpCTSA family protein id=24659467 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peroxiredoxin {ECO:0000313|EMBL:CBH24636.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_6_scaffold_24_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(707..1936)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9D2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24637.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2154..3845
DNA (1692bp) protein (564aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ABC44349.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ABC44349.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2E1_SALRD
pruA; 1-pyrroline-5-carboxylate dehydrogenase
sw_6_scaffold_24_4

Not on your lists

4360..4713
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Aquimarina agarilytica RepID=UPI00028834F5
Uncharacterized protein {ECO:0000313|EMBL:KKM96903.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_6_scaffold_24_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4904..5383
DNA (480bp) protein (160aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24639.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659470 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_24_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5507..6436
DNA (930bp) protein (310aa)
GntR family transcriptional regulatory protein {ECO:0000313|EMBL:CBH24640.1}; EC=2.6.1.- {ECO:0000313|EMBL:CBH24640.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
GntR family transcriptional regulator
GntR family transcriptional regulator id=24659471 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_24_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6449..9082)
DNA (2634bp) protein (878aa)
Uncharacterized domain HDIG protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2D8_SALRD
Uncharacterized domain HDIG protein {ECO:0000313|EMBL:ABC43615.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
hypothetical protein
sw_6_scaffold_24_trna_2
unknown

Not on your lists

comp(9270..9343)
DNA (74bp)
transferRNA
sw_6_scaffold_24_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9483..10712)
DNA (1230bp) protein (410aa)
OsmC-like protein
OsmC-like protein; K06889; K07397 putative redox protein id=24659474 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
OsmC-like protein {ECO:0000313|EMBL:ABC44734.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_6_scaffold_24_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10797..11570)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9D9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24644.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_10
unknown

Not on your lists

12093..12398
DNA (306bp) protein (102aa)

This feature has no annotations

sw_6_scaffold_24_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12615..13697
DNA (1083bp) protein (361aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=761659 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E1_SALRM
aroB; 3-dehydroquinate synthase
sw_6_scaffold_24_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13814..18607
DNA (4794bp) protein (1598aa)
hypothetical protein id=24659478 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24647.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
sw_6_scaffold_24_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19035..21032
DNA (1998bp) protein (666aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CBH24648.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=761659 species="B
Ribonuclease R n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E3_SALRM
rnr; ribonuclease R
sw_6_scaffold_24_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21186..22388)
DNA (1203bp) protein (401aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AEN72636.1}; EC=1.1.1.95 {ECO:0000313|EMBL:AEN72636.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
2-hydroxyacid dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B6409E
sw_6_scaffold_24_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22439..23704)
DNA (1266bp) protein (422aa)
hypothetical protein
hypothetical protein id=24659480 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44818.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_16
unknown

Not on your lists

23901..24023
DNA (123bp) protein (41aa)

This feature has no annotations

sw_6_scaffold_24_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24158..24922)
DNA (765bp) protein (255aa)
PAP2 superfamily protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E5_SALRM
PAP2 superfamily protein
PAP2 superfamily protein {ECO:0000313|EMBL:CBH24650.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_6_scaffold_24_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(25164..26228)
DNA (1065bp) protein (355aa)
recA; recA protein
recA; recombinase A; K03553 recombination protein RecA id=24659482 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=309807 species="Bacteria; Bacteroid
sw_6_scaffold_24_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26532..27440)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24652.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27760..28593
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24653.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28606..30717
DNA (2112bp) protein (704aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9E9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24654.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30960..31355
DNA (396bp) protein (132aa)
Response regulator n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2C4_SALRD
two component response regulator
Two component response regulator {ECO:0000313|EMBL:CBH24655.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_6_scaffold_24_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31468..31848)
DNA (381bp) protein (127aa)
hypothetical protein
hypothetical protein id=24659487 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24656.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32023..34968)
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B627AF
WD40-like beta propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AEN73557.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
sw_6_scaffold_24_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35098..35745
DNA (648bp) protein (216aa)
hypothetical protein
hypothetical protein id=24659488 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24657.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_24_trna_1
unknown

Not on your lists

comp(36058..36146)
DNA (89bp)
transferRNA
sw_6_scaffold_24_26
unknown

Not on your lists

36417..36647
DNA (231bp) protein (77aa)

This feature has no annotations

sw_6_scaffold_24_27
unknown

Not on your lists

comp(36644..36916)
DNA (273bp) protein (91aa)

This feature has no annotations

sw_6_scaffold_24_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(36993..39026)
DNA (2034bp) protein (678aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
Alanine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYA_SALRD
alaS; alanyl-tRNA synthetase
Displaying items 1-30 of 31 in total

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