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sw_6_scaffold_256

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_256_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)
folE; GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=24658743 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE; GTP cyclohydrolase I
sw_6_scaffold_256_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(181..594)
DNA (414bp) protein (138aa)
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=24658742 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
6-pyruvoyl-tetrahydropterin synthase
sw_6_scaffold_256_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

875..1219
DNA (345bp) protein (115aa)
hypothetical protein
HIT-like protein id=24658741 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hypothetical HIT-like protein slr1234 {ECO:0000313|EMBL:ABC44152.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_6_scaffold_256_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1315..1914
DNA (600bp) protein (200aa)
coaE; dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24] id=24658740 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dephospho-CoA kinase {ECO:0000255|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000255|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000255|HAMAP-Rule:MF_00376}; TaxID=309807 species="Bacteria; Ba
coaE; dephospho-CoA kinase
sw_6_scaffold_256_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2526..3224
DNA (699bp) protein (233aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
phoR; Alkaline phosphatase synthesis sensor protein phoR
phoR; Alkaline phosphatase synthesis sensor protein phoR id=24658739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_256_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3453..4229
DNA (777bp) protein (259aa)
luxR; regulatory protein, LuxR:response regulator receiver
luxR; regulatory protein, LuxR:response regulator receiver id=24658738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:CBH25927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_6_scaffold_256_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4520..5209
DNA (690bp) protein (230aa)
Two-component system response regulator n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD20_SALRM
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CBH25925.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_6_scaffold_256_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5716..6144)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=24657231 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23377.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_256_trna_1
unknown

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6284..6357
DNA (74bp)
transferRNA
sw_6_scaffold_256_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6509..6778
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=24657229 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23375.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_256_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6782..7021)
DNA (240bp) protein (80aa)
hypothetical protein
hypothetical protein id=24657228 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23374.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_256_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7018..7188)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H5R8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23373.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_256_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7451..8833)
DNA (1383bp) protein (461aa)
Probable oxidoreductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB8_SALRM
oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:CBH25673.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_256_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9116..10681)
DNA (1566bp) protein (522aa)
Sodium/glucose cotransporter n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R7_SALRM
sodium/glucose cotransporter
Sodium/glucose cotransporter {ECO:0000313|EMBL:CBH23372.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_6_scaffold_256_14
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11169..14483
DNA (3315bp) protein (1105aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Joostella marina DSM 19592 RepID=I3C9I0_9FLAO
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EIJ40273.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
SusC/RagA family TonB-linked outer membrane protein
sw_6_scaffold_256_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14554..16512
DNA (1959bp) protein (653aa)
RagB/SusD domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PV76_CHIPD
carbohydrate-binding protein SusD
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD02276.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_6_scaffold_256_16

Not on your lists

16745..20089
DNA (3345bp) protein (1115aa)
RNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B75E45
Uncharacterized protein {ECO:0000313|EMBL:KKN32502.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ASPIC/UnbV domain protein
sw_6_scaffold_256_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20285..21061)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ51_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48509.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_6_scaffold_256_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21165..22487)
DNA (1323bp) protein (441aa)
Glycosyl hydrolase family 109 protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GF55_9BACT
Glycosyl hydrolase family 109 protein {ECO:0000313|EMBL:CCH52530.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.
oxidoreductase domain-containing protein
sw_6_scaffold_256_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22525..23388)
DNA (864bp) protein (288aa)
N-acetylglucosamine kinase, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5L2_SALRD
N-acetylglucosamine kinase
N-acetylglucosamine kinase, putative {ECO:0000313|EMBL:ABC44085.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_6_scaffold_256_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23759..26815)
DNA (3057bp) protein (1019aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
Beta-N-acetylglucosaminidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R5_SALRM
bglX; beta-N-acetylglucosaminidase
sw_6_scaffold_256_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26846..28684)
DNA (1839bp) protein (613aa)
Na+/proline symporter n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5L4_SALRD
Na+/proline symporter {ECO:0000313|EMBL:CBH23369.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
putP; Na+/proline symporter
sw_6_scaffold_256_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28874..29053
DNA (180bp) protein (60aa)
Putative membrane protein {ECO:0000313|EMBL:CDM22912.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
sw_6_scaffold_256_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29197..29895
DNA (699bp) protein (233aa)
short-chain dehydrogenase
short-chain dehydrogenase id=24658727 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable short-chain dehydrogenase {ECO:0000313|EMBL:CBH25913.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_6_scaffold_256_24
unknown

Not on your lists

29943..30206
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 25 items

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