ggKbase home page

sw_6_scaffold_281

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_281_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..1118)
DNA (1116bp) protein (372aa)
Glycosyl transferase, group 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B9_SALRM
rfaG; group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBH23574.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_6_scaffold_281_2
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1233..2801)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036D0C20
putative nucleoside-diphosphate sugar epimerase Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
multidrug MFS transporter
sw_6_scaffold_281_3
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2844..4040)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003603D5F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ63051.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
sw_6_scaffold_281_4
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4169..5143)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CT78_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI15541.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera rad
sw_6_scaffold_281_5
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5140..5775)
DNA (636bp) protein (212aa)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0Z4_GRAMM
Kitasatospora griseola strain MF730-N6 RKJC_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ67134.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
undecaprenyl-phosphate galactose phosphotransferase
sw_6_scaffold_281_6
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5781..7223)
DNA (1443bp) protein (481aa)
Glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVZ6_KYRT2
sw_6_scaffold_281_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7501..8412
DNA (912bp) protein (304aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732, ECO:0000313|EMBL:CBH23592.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
Sulfate adenylyltransferase subunit 2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D7_SALRM
cysD; sulfate adenylyltransferase
sw_6_scaffold_281_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8517..10406
DNA (1890bp) protein (630aa)
Sulfate adenylyltransferase, large subunit subfamily, putative {ECO:0000313|EMBL:ABC44032.1}; EC=2.7.7.4 {ECO:0000313|EMBL:ABC44032.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Or
Sulfate adenylyltransferase, large subunit subfamily, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S507_SALRD
sulfate adenylyltransferase large subunit
sw_6_scaffold_281_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10522..10947
DNA (426bp) protein (142aa)
nucleotidyltransferase
nucleotidyltransferase id=24657432 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Nucleotidyltransferase {ECO:0000313|EMBL:CBH23596.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_6_scaffold_281_10
unknown

Not on your lists

10934..11044
DNA (111bp) protein (37aa)

This feature has no annotations

sw_6_scaffold_281_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11041..11178
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6E3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23598.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_281_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11208..11528
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6E3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23598.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_281_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11576..11905
DNA (330bp) protein (110aa)
Nucleotidyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6E4_SALRM
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:CBH23599.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_6_scaffold_281_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11877..12320
DNA (444bp) protein (148aa)
HEPN domain, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S501_SALRD
HEPN domain-containing protein
HEPN domain, putative {ECO:0000313|EMBL:ABC44476.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_6_scaffold_281_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12317..13342
DNA (1026bp) protein (342aa)
rfbB; dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=24657439 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
rfbB; dTDP-glucose 4,6-dehydratase
sw_6_scaffold_281_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13451..14368
DNA (918bp) protein (306aa)
rfbA; Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBH22832.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBH22832.1};; TaxID=761659 species=
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW03_SALRM
sw_6_scaffold_281_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14401..14961
DNA (561bp) protein (187aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CBH22831.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CBH22831.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW02_SALRM
sw_6_scaffold_281_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14985..15896
DNA (912bp) protein (304aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBH22830.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBH22830.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
dTDP-4-dehydrorhamnose reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CW01_SALRM
sw_6_scaffold_281_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16082..19162
DNA (3081bp) protein (1027aa)
wza; Capsule polysaccharide export system periplasmic protein id=24657443 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
wza; Capsule polysaccharide export system periplasmic protein
Capsule polysaccharide export system periplasmic protein {ECO:0000313|EMBL:CBH23605.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
sw_6_scaffold_281_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19214..20521
DNA (1308bp) protein (436aa)
Chain length determinant protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6F5_SALRM
Chain length determinant protein
Chain length determinant protein {ECO:0000313|EMBL:CBH23610.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_6_scaffold_281_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20621..22420
DNA (1800bp) protein (600aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H567_SALRM
ABC transporter ATP-binding protein/permease
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH23172.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_6_scaffold_281_22
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22448..23494
DNA (1047bp) protein (349aa)
N-acetyl glucosamine/N-acetyl galactosamine epimerase n=1 Tax=Salisaeta longa RepID=UPI0003B3C39C
UDP-N-acetylglucosamine 4,6-dehydratase Tax=RBG_13_Planctomycetes_63_9_curated
UDP-N-acetylglucosamine 4,6-dehydratase
sw_6_scaffold_281_23
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23523..24719
DNA (1197bp) protein (399aa)
spore coat protein n=1 Tax=Salisaeta longa RepID=UPI0003B43CC5
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABU56895.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="R
sw_6_scaffold_281_24
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

24760..25239
DNA (480bp) protein (160aa)
acylneuraminate cytidylyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B33B08
acylneuraminate cytidylyltransferase
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:ADR37616.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profu
Displaying 24 items

View Taxonomy