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sw_6_scaffold_319

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_319_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3..1277)
DNA (1275bp) protein (425aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B66F9F
Nqo1 {ECO:0000313|EMBL:AAY43000.1}; TaxID=29549 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (Rhodothermus ob
sw_6_scaffold_319_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1381..1983)
DNA (603bp) protein (201aa)
nuoE; NADH dehydrogenase (ubiquinone), 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] id=24657248 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:CBH23394.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBH23394.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
NADH-ubiquinone oxidoreductase 24 kDa subunit
sw_6_scaffold_319_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2064..3413)
DNA (1350bp) protein (450aa)
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] id=24657247 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa
sw_6_scaffold_319_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3471..4184)
DNA (714bp) protein (238aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; EC=1.6.99.5 {ECO:0000313|EMBL:CBH23392.1};; NADH dehydrogenase I subunit C {ECO
NADH-quinone oxidoreductase subunit C n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5T7_SALRM
nuoC; NADH-quinone oxidoreductase subunit C/D
sw_6_scaffold_319_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4265..4909)
DNA (645bp) protein (215aa)
nuoB; NADH-quinone oxidoreductase subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] id=24657245 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit B; EC=1.6.5.11;; NADH dehydrogenase I subunit B; NDH-1 subunit B; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
nuoB; NADH-quinone oxidoreductase subunit B
sw_6_scaffold_319_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5107..5481)
DNA (375bp) protein (125aa)
NADH-ubiquinone oxidoreductase; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] id=24657244 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-ubiquinone oxidoreductase
sw_6_scaffold_319_7
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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5624..6190
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD40759.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
sw_6_scaffold_319_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6323..6817)
DNA (495bp) protein (165aa)
hypothetical protein
hypothetical protein id=24657239 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23385.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_319_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6814..8679)
DNA (1866bp) protein (622aa)
Glycoside hydrolase {ECO:0000313|EMBL:CBH23384.1}; EC=3.2.1.- {ECO:0000313|EMBL:CBH23384.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Glycoside hydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5S9_SALRM
glycoside hydrolase
sw_6_scaffold_319_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8779..9576)
DNA (798bp) protein (266aa)
Endonuclease-exonuclease-phosphatase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNA1_9EURY
endonuclease/exonuclease/phosphatase
Endonuclease-exonuclease-phosphatase protein {ECO:0000313|EMBL:ERJ07804.1}; Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:CCQ33394.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacte
sw_6_scaffold_319_11
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10024..11268)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRH0_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW22181.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylo
glucose sorbosone dehydrogenase
sw_6_scaffold_319_12
unknown

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11480..11779
DNA (300bp) protein (100aa)

This feature has no annotations

sw_6_scaffold_319_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11896..13431)
DNA (1536bp) protein (512aa)
carboxypeptidase-like protein
carboxypeptidase-like protein id=24657232 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carboxypeptidase-related protein {ECO:0000313|EMBL:CBH23378.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_6_scaffold_319_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13520..14716)
DNA (1197bp) protein (399aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985, ECO:0000313|EMBL:CBH23379
Glycine C-acetyltransferase n=2 Tax=Salinibacter ruber RepID=D5H5S4_SALRM
kbl; glycine C-acetyltransferase
sw_6_scaffold_319_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15101..15286)
DNA (186bp) protein (62aa)
Epimerase/reductase, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5K3_SALRD
epimerase/reductase
Epimerase/reductase, putative {ECO:0000313|EMBL:ABC45606.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
Displaying 15 items

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