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sw_6_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_35_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Phytoene synthase {ECO:0000313|EMBL:CBH24543.1}; EC=2.5.1.- {ECO:0000313|EMBL:CBH24543.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_6_scaffold_35_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

201..1343
DNA (1143bp) protein (381aa)
wcaA; family 2 glycosyl transferase
wcaA; family 2 glycosyl transferase id=24659377 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBH24540.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_6_scaffold_35_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1412..1669
DNA (258bp) protein (86aa)
hypothetical protein
hypothetical protein id=24659376 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24539.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_35_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1700..2629
DNA (930bp) protein (310aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CBH24538.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CBH24538.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H933_SALRM
ldcA; Muramoyltetrapeptide carboxypeptidase
sw_6_scaffold_35_5
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2670..3140)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M1E3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD51605.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
sw_6_scaffold_35_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3162..3617)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H553_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23158.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_35_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3838..4440
DNA (603bp) protein (201aa)
Transcription elongation factor GreA n=2 Tax=Salinibacter ruber RepID=D5H932_SALRM
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=761659 species="Bacteria
sw_6_scaffold_35_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4544..5539
DNA (996bp) protein (332aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;;
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP9_RHOM4
monofunctional biosynthetic peptidoglycan transglycosylase
sw_6_scaffold_35_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5571..6614
DNA (1044bp) protein (348aa)
Threonine aldolase {ECO:0000313|EMBL:CBH24536.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBH24536.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Threonine aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H931_SALRM
ltaE; threonine aldolase
sw_6_scaffold_35_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6635..7246)
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H930_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
sw_6_scaffold_35_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7311..8396)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3284C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65049.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
sw_6_scaffold_35_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8655..9317)
DNA (663bp) protein (221aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase id=24659371 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ABC44266.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_6_scaffold_35_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9452..9955
DNA (504bp) protein (168aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_6_scaffold_35_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


10200..10460
DNA (261bp) protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_6_scaffold_35_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10637..11878
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_35_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11871..12797)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H925_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_35_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13191..15269
DNA (2079bp) protein (693aa)
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase
sw_6_scaffold_35_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15284..16147)
DNA (864bp) protein (288aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
sw_6_scaffold_35_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16257..17216
DNA (960bp) protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
phoH; PhoH-lihe protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_6_scaffold_35_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17410..18264)
DNA (855bp) protein (285aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
hypothetical protein id=24656764 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
3-hydroxybutyryl-CoA dehydrogenase
sw_6_scaffold_35_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18688..19119)
DNA (432bp) protein (144aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=2 Tax=Salinibacter ruber RepID=PAND_SALRD
panD; aspartate 1-decarboxylase
sw_6_scaffold_35_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19168..20049)
DNA (882bp) protein (294aa)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PANC_SALRD
panC; pantoate--beta-alanine ligase
sw_6_scaffold_35_23
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20475..21356)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis MC28 RepID=K0FM72_BACTU
methyl-accepting chemotaxis protein
Uncharacterized protein {ECO:0000313|EMBL:AFU12956.1}; TaxID=1195464 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis
sw_6_scaffold_35_24
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21579..22610
DNA (1032bp) protein (344aa)
sodium:calcium antiporter n=1 Tax=Halomonas smyrnensis RepID=UPI000368CF20
Sodium:calcium antiporter {ECO:0000313|EMBL:KGE78392.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
Na+/Ca2+-exchanging protein
sw_6_scaffold_35_25
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(23133..23603)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I114_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98951.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_6_scaffold_35_26
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(23786..25885)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I113_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98950.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_6_scaffold_35_27
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26223..26927
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C7Z6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEJ69686.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
sw_6_scaffold_35_28
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26984..27778
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VI20_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR69626.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
hypothetical protein
sw_6_scaffold_35_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27855..28448
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9K6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24711.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_35_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28347..28913)
DNA (567bp) protein (189aa)
Auracyanin A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S270_SALRD
auracyanin A
Auracyanin A {ECO:0000313|EMBL:ABC43792.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain D
Displaying items 1-30 of 35 in total

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