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sw_6_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_41_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..865)
DNA (864bp) protein (288aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=24659341 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase, putative {ECO:0000313|EMBL:ABC45288.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
sw_6_scaffold_41_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(869..1897)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H905_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24510.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1930..3210
DNA (1281bp) protein (427aa)
hypothetical protein
hypothetical protein id=24659343 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45821.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3355..3951
DNA (597bp) protein (199aa)
hypothetical protein
hypothetical protein id=24659054 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24213.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_5
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4127..4369)
DNA (243bp) protein (81aa)
urocanate hydratase (EC:4.2.1.49)
Probable urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577};; Imidazolonepropionate hydrolase {ECO
Probable urocanate hydratase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0P1_HALTV
sw_6_scaffold_41_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4381..4890)
DNA (510bp) protein (170aa)
hypothetical protein
hypothetical protein id=24659056 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24215.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5125..6357
DNA (1233bp) protein (411aa)
acyl-CoA dehydrogenases; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] id=24659057 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyl-CoA dehydrogenases {ECO:0000313|EMBL:CBH24216.1}; EC=1.3.99.- {ECO:0000313|EMBL:CBH24216.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
acyl-CoA dehydrogenases
sw_6_scaffold_41_8
RLO_PER_ii_53_10, PER-ii, Bacteria

Not on your lists

comp(6378..6977)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3EED9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PER_ii_53_10_curated
hypothetical protein
sw_6_scaffold_41_9
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7217..7357)
DNA (141bp) protein (47aa)
hypothetical protein Tax=GWF2_Lentisphaerae_45_14_curated
sw_6_scaffold_41_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7379..7942)
DNA (564bp) protein (188aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:AEN73836.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AEN73836.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
pyruvate phosphate dikinase n=1 Tax=Salisaeta longa RepID=UPI0003B4C18B
pyruvate, phosphate dikinase
sw_6_scaffold_41_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8214..8732
DNA (519bp) protein (173aa)
Starvation induced DNA binding protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3I7_SALRD
starvation induced DNA binding protein
Starvation induced DNA binding protein {ECO:0000313|EMBL:ABC46294.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_6_scaffold_41_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9022..11607
DNA (2586bp) protein (862aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBH24218.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=761659
DNA topoisomerase 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H863_SALRM
topA; DNA topoisomerase I
sw_6_scaffold_41_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11706..12680)
DNA (975bp) protein (325aa)
rsgA; ribosome-associated GTPase; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] id=24659060 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
rsgA; ribosome-associated GTPase
sw_6_scaffold_41_14
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12737..13075
DNA (339bp) protein (113aa)
hypothetical protein id=24659061 bin=Salinibacter_ruber tax=Salinibacter_ruber
hypothetical protein id=24659061 bin=Salinibacter_ruber tax=Salinibacter_ruber
sw_6_scaffold_41_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13146..13388
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3I4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44427.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_16
unknown

Not on your lists

13553..14443
DNA (891bp) protein (297aa)

This feature has no annotations

sw_6_scaffold_41_17
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14630..15835
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5F3A6
sw_6_scaffold_41_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15877..17838)
DNA (1962bp) protein (654aa)
signal transduction histidine kinase id=24659063 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBH24221.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_6_scaffold_41_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17929..19350)
DNA (1422bp) protein (474aa)
Cystathionine beta-synthase {ECO:0000313|EMBL:CBH24222.1}; EC=4.2.1.22 {ECO:0000313|EMBL:CBH24222.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Cystathionine beta-synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H867_SALRM
cysK; cystathionine beta-synthase
sw_6_scaffold_41_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19858..20943)
DNA (1086bp) protein (362aa)
hypothetical protein
hypothetical protein id=24659065 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24224.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21093..22274
DNA (1182bp) protein (394aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SUCC_SALRD
succinyl-CoA synthetase beta chain
sw_6_scaffold_41_22
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22246..23346)
DNA (1101bp) protein (367aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrono
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWA5_9EURY
DNA modification methylase
sw_6_scaffold_41_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23706..26627)
DNA (2922bp) protein (974aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44616.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26721..27704)
DNA (984bp) protein (328aa)
Xylose repressor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G0_SALRD
xylose repressor
Xylose repressor {ECO:0000313|EMBL:ABC44663.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
sw_6_scaffold_41_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27795..28094)
DNA (300bp) protein (100aa)
ftsB; cell division protein
ftsB; cell division protein; K05589 cell division protein FtsB id=24657658 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Septum formation initiator superfamily {ECO:0000313|EMBL:ABC45110.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_6_scaffold_41_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28103..29392)
DNA (1290bp) protein (430aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBH23886.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBH23886.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMA
Enolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H781_SALRM
eno2; enolase
sw_6_scaffold_41_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29586..30938)
DNA (1353bp) protein (451aa)
hypothetical protein id=24657660 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:CBH23887.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_6_scaffold_41_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31075..32415)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H783_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23888.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32468..33820)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H784_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23889.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_41_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34034..34804)
DNA (771bp) protein (257aa)
glgA; glycogen synthase; K00703 starch synthase [EC:2.4.1.21] id=24657663 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycogen synthase {ECO:0000313|EMBL:CBH23890.1}; EC=2.4.1.21 {ECO:0000313|EMBL:CBH23890.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
glgA; glycogen synthase
Displaying items 1-30 of 32 in total

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