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sw_6_scaffold_46

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_46_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..958)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B627DB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25445.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1204..2619)
DNA (1416bp) protein (472aa)
mgtE; magnesium transporter
mgtE; magnesium transporter; K06213 magnesium transporter id=24658136 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_6_scaffold_46_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2694..3494)
DNA (801bp) protein (267aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=24658137 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
ksgA; dimethyladenosine transferase
sw_6_scaffold_46_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3573..4679)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBD7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46152.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4954..6129)
DNA (1176bp) protein (392aa)
hypothetical protein
hypothetical protein id=24658139 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43947.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_6_scaffold_46_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6459..7724)
DNA (1266bp) protein (422aa)
ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=24658140 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddlA; D-alanine--D-alanine ligase
sw_6_scaffold_46_7
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8290..8994
DNA (705bp) protein (235aa)
metallophosphoesterase n=1 Tax=Salisaeta longa RepID=UPI0003B76A5C
metallophosphoesterase Tax=GWA2_Deltaproteobacteria_54_12_curated
metallophosphoesterase
sw_6_scaffold_46_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9002..10387)
DNA (1386bp) protein (462aa)
hypothetical protein
hypothetical protein; K07071 id=24657595 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45307.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10675..11865
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23790.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12246..13106
DNA (861bp) protein (287aa)
purine nucleoside phosphorylase I; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] id=24657560 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=309807 species="Bac
purine nucleoside phosphorylase I
sw_6_scaffold_46_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13208..15673
DNA (2466bp) protein (822aa)
Bifunctional aspartokinase/homoserine dehydrogenase II {ECO:0000313|EMBL:CBH23788.1}; EC=2.7.2.4 {ECO:0000313|EMBL:CBH23788.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
Bifunctional aspartokinase/homoserine dehydrogenase II n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y3_SALRM
metL; Bifunctional aspartokinase/homoserine dehydrogenase II
sw_6_scaffold_46_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15824..16774
DNA (951bp) protein (317aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y2_SALRM
thrB; Homoserine kinase
sw_6_scaffold_46_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16969..17820
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Salinibacter ruber RepID=ISPE_SALRD
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
sw_6_scaffold_46_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17944..18564)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23785.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18675..19970)
DNA (1296bp) protein (432aa)
nuclease SbcCD; K03547 exonuclease SbcD id=24657555 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
nuclease SbcCD
Nuclease SbcCD, D subunit subfamily, putative {ECO:0000313|EMBL:ABC45592.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_6_scaffold_46_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20084..22438)
DNA (2355bp) protein (785aa)
transglycosylase domain-containing protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] id=24657554 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
transglycosylase domain-containing protein
Transglycosylase domain protein {ECO:0000313|EMBL:ABC43731.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_6_scaffold_46_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22517..23248)
DNA (732bp) protein (244aa)
serine/threonine protein phosphatase family protein; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24657553 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
serine/threonine protein phosphatase family protein
Ser/Thr protein phosphatase superfamily {ECO:0000313|EMBL:ABC44365.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_6_scaffold_46_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23429..24172
DNA (744bp) protein (248aa)
Cytoplasmic membrane protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Q9_SALRD
cytoplasmic membrane protein
Rhomboid-like protein {ECO:0000313|EMBL:CBH23781.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_6_scaffold_46_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24671..25594
DNA (924bp) protein (308aa)
Rhomboid family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6X5_SALRM
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:CBH23780.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25804..26973
DNA (1170bp) protein (390aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=24657550 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00186763};; 1-hydroxy-2-methyl-2
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
sw_6_scaffold_46_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27033..27395)
DNA (363bp) protein (121aa)
hypothetical protein
hypothetical protein id=24657096 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43963.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_46_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27555..28505)
DNA (951bp) protein (317aa)
ldh; L-lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] id=24657549 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBH23778.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:C
L-lactate dehydrogenase
sw_6_scaffold_46_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28557..28976)
DNA (420bp) protein (140aa)
hypothetical protein
DNA-binding protein id=24657548 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23777.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 23 items

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