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sw_6_scaffold_534

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_534_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..562
DNA (561bp) protein (187aa)
hypothetical protein
hypothetical protein id=24658117 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25318.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_534_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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794..3139
DNA (2346bp) protein (782aa)
outer membrane protein
outer membrane protein id=24658116 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CBH25317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
sw_6_scaffold_534_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3200..4135
DNA (936bp) protein (312aa)
hypothetical protein
hypothetical protein id=24658115 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25316.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_534_4
unknown

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4202..4345
DNA (144bp) protein (48aa)

This feature has no annotations

sw_6_scaffold_534_5
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4429..5403)
DNA (975bp) protein (325aa)
Transposase, IS4 family n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0BYX7_ACAM1
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABW28277.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
sw_6_scaffold_534_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5632..6273
DNA (642bp) protein (214aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=24658114 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CBH25315.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBH25315.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidete
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
sw_6_scaffold_534_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6450..7424
DNA (975bp) protein (325aa)
ftsY; signal recognition particle GTPase
ftsY; signal recognition particle GTPase; K03110 fused signal recognition particle receptor id=24658113 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order I
sw_6_scaffold_534_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7641..8564
DNA (924bp) protein (308aa)
fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=24658112 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=761659 species="B
fmt; methionyl-tRNA formyltransferase
sw_6_scaffold_534_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8804..9799
DNA (996bp) protein (332aa)
ATPase family associated with various cellular activities (AAA), putative n=2 Tax=Salinibacter ruber RepID=D5HBA7_SALRM
ATPase
ATPase family associated with various cellular activities (AAA), putative {ECO:0000313|EMBL:ABC44686.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_6_scaffold_534_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10083..11099
DNA (1017bp) protein (339aa)
hprK; HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] id=24658110 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
hprK; HPr kinase/phosphorylase
sw_6_scaffold_534_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11433..12443
DNA (1011bp) protein (337aa)
Putative peptidase n=2 Tax=Salinibacter ruber RepID=D5HBA5_SALRM
peptidase
Putative peptidase {ECO:0000313|EMBL:CBH25310.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_6_scaffold_534_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12622..15219
DNA (2598bp) protein (866aa)
Outer membrane protein, OMP85 family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBA4_SALRM
Outer membrane protein, OMP85 family {ECO:0000313|EMBL:CBH25309.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
outer membrane protein, OMP85 family
sw_6_scaffold_534_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15265..15864
DNA (600bp) protein (200aa)
Crp family transcriptional regulator
Crp family transcriptional regulator id=24658107 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription regulator, Crp family, putative {ECO:0000313|EMBL:ABC44271.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_6_scaffold_534_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16057..17856
DNA (1800bp) protein (600aa)
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH25307.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
ABC transporter ATP-binding protein/permease
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial id=24658106 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_534_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17970..18923
DNA (954bp) protein (318aa)
rnz; ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] id=24658105 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:CBH25306.1}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:CBH2530
rnz; ribonuclease Z
Displaying 15 items

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