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sw_6_scaffold_77

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_77_1
unknown

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164..376
DNA (213bp) protein (71aa)

This feature has no annotations

sw_6_scaffold_77_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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598..816
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J5R3_NOSP7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
sw_6_scaffold_77_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

813..1082
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B39760
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
sw_6_scaffold_77_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1118..1798)
DNA (681bp) protein (227aa)
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CBH24758.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBH24758.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphoglycolate phosphatase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q3_SALRM
gph; phosphoglycolate phosphatase
sw_6_scaffold_77_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2097..4880
DNA (2784bp) protein (928aa)
DNA polymerase I {ECO:0000313|EMBL:CBH24757.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24757.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q2_SALRM
polA; DNA polymerase I
sw_6_scaffold_77_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5001..6317
DNA (1317bp) protein (439aa)
zinc protease; K07263 zinc protease [EC:3.4.24.-] id=24659593 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc protease {ECO:0000313|EMBL:CBH24755.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24755.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
protease
sw_6_scaffold_77_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6465..7772
DNA (1308bp) protein (436aa)
Putative zinc protease {ECO:0000313|EMBL:CBH24754.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24754.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Putative zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P9_SALRM
zinc protease
sw_6_scaffold_77_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7782..8462)
DNA (681bp) protein (227aa)
PspC domain-containing protein
PspC domain-containing protein id=24659591 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_6_scaffold_77_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8666..9268)
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P7_SALRM
5-formyltetrahydrofolate cyclo-ligase
sw_6_scaffold_77_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9597..10982
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
sw_6_scaffold_77_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11329..11982
DNA (654bp) protein (218aa)
rpsP; 30S ribosomal protein S16
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_6_scaffold_77_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12012..12605
DNA (594bp) protein (198aa)
rimM; 16S rRNA processing protein RimM
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=24659587 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_6_scaffold_77_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12677..13390
DNA (714bp) protein (238aa)
trmD; tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=24659586 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltr
trmD; tRNA (guanine-N1)-methyltransferase
sw_6_scaffold_77_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13460..13816
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=2 Tax=Salinibacter ruber RepID=RL19_SALRD
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_6_scaffold_77_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13898..14710
DNA (813bp) protein (271aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_77_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14762..15226
DNA (465bp) protein (155aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_6_scaffold_77_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15323..16558
DNA (1236bp) protein (412aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYY_SALRD
tyrS; tyrosyl-tRNA synthetase
sw_6_scaffold_77_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16598..18673)
DNA (2076bp) protein (692aa)
Lysyl endopeptidase [Precursor] {ECO:0000313|EMBL:CBH24743.1}; EC=3.4.21.50 {ECO:0000313|EMBL:CBH24743.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Lysyl endopeptidase [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N8_SALRM
prpL; Lysyl endopeptidase
sw_6_scaffold_77_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18707..19216)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S240_SALRD
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
sw_6_scaffold_77_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19427..20566)
DNA (1140bp) protein (380aa)
Phosphoribosylaminoimidazole carboxylase ATPase-subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N6_SALRM
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
sw_6_scaffold_77_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20716..23457)
DNA (2742bp) protein (914aa)
DNA translocase ftsK n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N5_SALRM
DNA translocase ftsK {ECO:0000313|EMBL:CBH24740.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
ftsK; DNA translocase ftsK
sw_6_scaffold_77_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23756..24493)
DNA (738bp) protein (246aa)
comB; 2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] id=24659577 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490, ECO:0000313|EMBL:CBH24739.1}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=761659 species="Bacteria; Bacteroidetes
comB; 2-phosphosulfolactate phosphatase
sw_6_scaffold_77_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24557..25681)
DNA (1125bp) protein (375aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
Aminomethyltransferase n=2 Tax=Salinibacter ruber RepID=D5H9N3_SALRM
gcvT; aminomethyltransferase
sw_6_scaffold_77_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25913..27025)
DNA (1113bp) protein (371aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:CBH24737.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CBH24737.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Prephenate dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N2_SALRM
tyrA; prephenate dehydrogenase
sw_6_scaffold_77_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27227..27469)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9M9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24734.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_77_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27615..29171)
DNA (1557bp) protein (519aa)
degP; periplasmic serine protease DO-like; K01362 [EC:3.4.21.-] id=24659571 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable periplasmic serine protease DO-like {ECO:0000313|EMBL:CBH24733.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH24733.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
degP; periplasmic serine protease DO-like
sw_6_scaffold_77_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29389..30795)
DNA (1407bp) protein (469aa)
fumC; fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2] id=24659570 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=309807 species="Bacteria; Bacte
fumC; fumarate hydratase
sw_6_scaffold_77_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(30942..31508)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K147_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93499.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_6_scaffold_77_29
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(32128..32499)
DNA (372bp) protein (124aa)
acyl-CoA dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B70C4D
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EPX58250.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
acyl-CoA dehydrogenase
sw_6_scaffold_77_30
unknown

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32880..33230
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 30 items

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