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sw_6_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_117_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9..518)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXV8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA00903.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_6_scaffold_117_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(671..949)
DNA (279bp) protein (93aa)
UPF0058 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ2_NATPD
hypothetical protein
UPF0058 family protein {ECO:0000313|EMBL:CAI49452.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_6_scaffold_117_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1241..1810
DNA (570bp) protein (190aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CX32_9EURY
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:ELZ26439.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
reductase ( nitrate reductase/sulfite dehydrogenase)
sw_6_scaffold_117_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1821..3155
DNA (1335bp) protein (445aa)
menF; isochorismate synthase (EC:5.4.4.2)
Isochorismate synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CT47_9EURY
Isochorismate synthase {ECO:0000313|EMBL:ELZ26440.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
sw_6_scaffold_117_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3152..4927
DNA (1776bp) protein (592aa)
menD; 2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.1.3.- 4.1.1.71)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000255|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000255|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000255|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MEND_NATPD
sw_6_scaffold_117_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4983..5981
DNA (999bp) protein (333aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=662477 speci
Naphthoate synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J2F2_HALVA
naphthoate synthase
sw_6_scaffold_117_7

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comp(6267..6959)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MIJ7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04778.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_117_8

Not on your lists

comp(7014..8117)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKJ9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04947.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_117_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8563..9504
DNA (942bp) protein (314aa)
Putative permease n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DVC6_9EURY
Putative permease {ECO:0000313|EMBL:ELZ39456.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;
permease
sw_6_scaffold_117_10
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9562..10581
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ABN1_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ71308.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_6_scaffold_117_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10583..10768)
DNA (186bp) protein (62aa)
hypothetical protein id=24619704 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH08644.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_6_scaffold_117_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10932..11558
DNA (627bp) protein (209aa)
Probable rRNA methyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS10_NATM8
probable rRNA methyltransferase
Probable rRNA methyltransferase {ECO:0000313|EMBL:CCQ37035.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
sw_6_scaffold_117_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11549..13171)
DNA (1623bp) protein (541aa)
rhomboid protein (EC:3.4.21.-)
Rhomboid family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN7_NATPD
Rhomboid family protein {ECO:0000313|EMBL:CAI49206.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_117_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13202..14209)
DNA (1008bp) protein (336aa)
qor3; NADPH:quinone reductase (EC:1.6.5.5)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5H8_9EURY
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ELZ17923.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halo
sw_6_scaffold_117_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14303..15382)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRP0_NATPD
hypothetical protein
APH family phosphotransferase {ECO:0000313|EMBL:CAI49203.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_6_scaffold_117_16
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15506..16768
DNA (1263bp) protein (421aa)
Acyl-CoA dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWJ9_HALBP
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ADQ69419.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_6_scaffold_117_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16986..17798
DNA (813bp) protein (271aa)
NAD-dependent protein deacetylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPE8_9EURY
NAD-dependent protein deacetylase {ECO:0000313|EMBL:EMA47248.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
NAD-dependent protein deacetylase
sw_6_scaffold_117_18
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17838..18245
DNA (408bp) protein (136aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RW62_HALTV
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB59451.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena t
sw_6_scaffold_117_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18242..18550)
DNA (309bp) protein (103aa)
Glutaredoxin n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPI1_NATPD
glx_3; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:CAI49970.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 3
sw_6_scaffold_117_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18610..19080
DNA (471bp) protein (157aa)
Peroxiredoxin-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKY8_9EURY
Peroxiredoxin-like protein {ECO:0000313|EMBL:EMA45404.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
Peroxiredoxin
sw_6_scaffold_117_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19318..20358
DNA (1041bp) protein (347aa)
ATP-binding protein Mrp 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQS1_9EURY
ATP-binding protein Mrp 1 {ECO:0000313|EMBL:ELZ25566.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
mrp_1; ATP-binding protein Mrp 1
sw_6_scaffold_117_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20355..20585
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQU0_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49504.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_117_23
unknown

Not on your lists

20587..20814
DNA (228bp) protein (76aa)

This feature has no annotations

sw_6_scaffold_117_trna_1
unknown

Not on your lists

20942..21024
DNA (83bp)
transferRNA
sw_6_scaffold_117_24
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21044..21562
DNA (519bp) protein (173aa)
30S ribosomal protein S13 n=3 Tax=Haloarcula RepID=RS13_HALMA
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae
sw_6_scaffold_117_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21562..22092
DNA (531bp) protein (177aa)
30S ribosomal protein S4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS4_NATPD
rps4p; 30S ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_6_scaffold_117_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22089..22352
DNA (264bp) protein (88aa)
30S ribosomal protein S11 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRN9_NATM8
rps11; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_6_scaffold_117_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22404..23150
DNA (747bp) protein (249aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE6_9EURY
RNA polymerase insert
sw_6_scaffold_117_trna_2
unknown

Not on your lists

23319..23403
DNA (85bp)
transferRNA
sw_6_scaffold_117_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23434..23784
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRK9_NATM8
rpl18e; 50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
Displaying items 1-30 of 37 in total

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