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sw_6_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_193_1
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..243
DNA (243bp) protein (81aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:ELZ96944.1};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=662479 s
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0INA2_9EURY
sw_6_scaffold_193_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(253..576)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55467.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_193_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

660..1268
DNA (609bp) protein (203aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Undecaprenyl diphosphate synthase protein {ECO:0000313|EMBL:ERJ06958.1}; EC=2.5.1.31 {ECO:0000313|EMBL:ERJ06958.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
Undecaprenyl pyrophosphate synthetase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D753_9EURY
sw_6_scaffold_193_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1344..2372)
DNA (1029bp) protein (343aa)
Restriction endonuclease, type I, EcoRI, R subunit/Type III n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XLC9_9EURY
Restriction endonuclease, type I, EcoRI, R subunit/Type III {ECO:0000313|EMBL:ELY61468.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
hypothetical protein
sw_6_scaffold_193_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2429..3340)
DNA (912bp) protein (304aa)
uppS_1; di-trans,poly-cis-decaprenylcistransferase 1; (Z)-prenyl diphosphate synthase 1 (EC:2.5.1.- 2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND7_NATPD
sw_6_scaffold_193_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3541..3735
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAC3_9EURY
Cold-shock protein {ECO:0000313|EMBL:AHG02797.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
cspD3; cold shock protein
sw_6_scaffold_193_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3896..4303
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50368.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_193_8
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4370..5452
DNA (1083bp) protein (361aa)
Heme biosynthesis protein NirGH n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8L8_9EURY
Heme biosynthesis protein NirGH {ECO:0000313|EMBL:ELZ80820.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC
nirGH; heme biosynthesis protein NirGH
sw_6_scaffold_193_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5449..6093
DNA (645bp) protein (215aa)
Siroheme synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNI1_9EURY
Siroheme synthase {ECO:0000313|EMBL:ELZ24825.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
uroporphyrin-III C-methyltransferase
sw_6_scaffold_193_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6159..7439
DNA (1281bp) protein (427aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3Q4_HALMD
sw_6_scaffold_193_11

Not on your lists

comp(7560..8435)
DNA (876bp) protein (292aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=14
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y3D5_9ARCH
sw_6_scaffold_193_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8539..8895
DNA (357bp) protein (119aa)
Hsp20-type molecular chaperone n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL19_NATM8
hsp20C; Hsp20-type molecular chaperone
Hsp20-type molecular chaperone {ECO:0000313|EMBL:CCQ36920.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_6_scaffold_193_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8864..10558
DNA (1695bp) protein (565aa)
Ubiquinone biosynthesis protein UbiB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISC5_NATPD
ubiB_1; ubiquinone biosynthesis transmembrane protein 1
UbiB family protein {ECO:0000313|EMBL:CAI48962.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_193_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10607..11668
DNA (1062bp) protein (354aa)
Class I and II aminotransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWB3_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EMA36639.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
class I and II aminotransferase
sw_6_scaffold_193_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11760..12137
DNA (378bp) protein (126aa)
Translation initiation factor 5A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ55_NATM8
tif5A; translation initiation factor aIF-5A
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
sw_6_scaffold_193_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12141..12947
DNA (807bp) protein (269aa)
agmatinase (EC:3.5.3.11)
Agmatinase, putative n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQW8_9EURY
Agmatinase, putative {ECO:0000313|EMBL:EFW93382.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
sw_6_scaffold_193_17
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12999..13769
DNA (771bp) protein (257aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797304 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALG5_NATGS
dinuclear metal center protein
sw_6_scaffold_193_18
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13764..14411)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P3J3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39329.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
sw_6_scaffold_193_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14512..15009
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IE06_9EURY
GNAT family acetyltransferase {ECO:0000313|EMBL:AHG04837.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
sortase-like acyltransferase
sw_6_scaffold_193_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15002..15856)
DNA (855bp) protein (285aa)
Zinc transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF54_9EURY
Zinc transporter {ECO:0000313|EMBL:EMA43973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
zinc transporter
sw_6_scaffold_193_21
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15906..16595)
DNA (690bp) protein (230aa)
dehydrogenase/reductase 14 (EC:1.1.1.-)
Short-chain family oxidoreductase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H3E3_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ78323.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM
sw_6_scaffold_193_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16887..18464
DNA (1578bp) protein (526aa)
crtI1; phytoene dehydrogenase (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Phytoene desaturase) {ECO:0000313|EMBL:CCQ37169.1}; EC=1.14.99.- {ECO:0000313|EMBL:CCQ37169.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL66_NATM8
sw_6_scaffold_193_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18465..19340
DNA (876bp) protein (292aa)
ubiA; prenyltransferase (EC:2.5.1.-)
Lycopene elongase {ECO:0000313|EMBL:CAI50474.1}; EC=2.5.1.- {ECO:0000313|EMBL:CAI50474.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
Lycopene elongase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN32_NATPD
sw_6_scaffold_193_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19333..20175
DNA (843bp) protein (281aa)
Carotene biosynthesis associated membrane protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAF9_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:EMA41380.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
carotenoid biosynthesis protein
sw_6_scaffold_193_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20172..21119)
DNA (948bp) protein (316aa)
crtB; phytoene synthase (EC:2.5.1.32)
Phytoene synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7F8_9EURY
Phytoene synthase {ECO:0000313|EMBL:EMA53488.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
sw_6_scaffold_193_26
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21696..22088
DNA (393bp) protein (131aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MRR1_9EURY
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ERG92814.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratu
UspA domain protein
sw_6_scaffold_193_27
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22126..22389
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RU80_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59149.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_6_scaffold_193_28
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22386..23615)
DNA (1230bp) protein (410aa)
lysine-ketoglutarate reductase/saccharopine dehydrogenase (EC:1.5.1.10 1.5.1.7)
LOR/SDH bifunctional protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KR22_HALAR
LOR/SDH bifunctional protein {ECO:0000313|EMBL:EMA23676.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
sw_6_scaffold_193_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23638..24072)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50391.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_193_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24213..25118
DNA (906bp) protein (302aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP5_NATM8
pdxS; pyridoxal biosynthesis lyase PdxS
Displaying items 1-30 of 48 in total

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