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sw_6_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_224_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..442)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKC9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45194.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_224_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(439..1554)
DNA (1116bp) protein (372aa)
GTP-binding protein Drg n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INI4_NATPD
GTP-binding protein
GTP-binding protein Drg {ECO:0000313|EMBL:CAI50319.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_224_3
unknown

Not on your lists

comp(1645..1887)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_6_scaffold_224_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1929..2129
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89873.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_6_scaffold_224_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2181..2669
DNA (489bp) protein (163aa)
50S ribosomal protein L11 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL11_NATPD
rpl11p; 50S ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_6_scaffold_224_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2964..4196
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT10_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25803.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_224_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4323..4961
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYP4_9EURY
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
rpl1; 50S ribosomal protein L1
sw_6_scaffold_224_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4958..6004
DNA (1047bp) protein (349aa)
50S ribosomal protein L10 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL10_NATPD
rplP0; acidic ribosomal protein P0
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000255|HAMAP-Rule:MF_00280}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_6_scaffold_224_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6011..6361
DNA (351bp) protein (117aa)
50S ribosomal protein L12 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND97_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rpl12p; 50S ribosomal protein L12P
sw_6_scaffold_224_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6587..7819
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_224_11
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7876..8538)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5G1_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK19471.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_6_scaffold_224_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8584..10002)
DNA (1419bp) protein (473aa)
cysS; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=348780 species="Archaea; Eur
Cysteine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INJ2_NATPD
sw_6_scaffold_224_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10202..11032
DNA (831bp) protein (277aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=797209 species="Archaea; Euryarchaeota; Haloba
galK; galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV03_9EURY
sw_6_scaffold_224_14
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11005..11163)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:ACV10240.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_6_scaffold_224_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11396..12262
DNA (867bp) protein (289aa)
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:CAI48885.1}; EC=4.99.1.3 {ECO:0000313|EMBL:CAI48885.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Sirohydrochlorin cobaltochelatase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISK1_NATPD
hypothetical protein
sw_6_scaffold_224_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12427..13902
DNA (1476bp) protein (492aa)
Phosphoesterase RecJ domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M0M9_HALMO
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EMA39372.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
DHH family phosphoesterase
sw_6_scaffold_224_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13945..14754
DNA (810bp) protein (270aa)
CBS/parB domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRJ3_NATPD
CBS domain-containing protein
CBS/parB domain protein {ECO:0000313|EMBL:CAI49250.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_224_18
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14816..16513
DNA (1698bp) protein (566aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase large subunit n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LSI1_9EURY
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:EMA35384.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitra
sw_6_scaffold_224_19
unknown

Not on your lists

comp(16520..16753)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_6_scaffold_224_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16795..18897)
DNA (2103bp) protein (701aa)
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-R
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYM_NATPD
sw_6_scaffold_224_21
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19470..20015)
DNA (546bp) protein (182aa)
Conserved hypothetical membrane protein, SNARE-associated Golgi protein family n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNC7_9EURY
conserved hypothetical membrane protein, SNARE-associated Golgi protein family
Conserved hypothetical membrane protein, SNARE-associated Golgi protein family {ECO:0000313|EMBL:CCQ34601.1}; Membrane protein YqaA {ECO:0000313|EMBL:ERJ05078.1}; TaxID=1033806 species="Archaea; Eurya
sw_6_scaffold_224_22
unknown

Not on your lists

comp(20072..20827)
DNA (756bp) protein (252aa)

This feature has no annotations

sw_6_scaffold_224_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21406..22173
DNA (768bp) protein (256aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYX5_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA38782.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
sw_6_scaffold_224_24
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22457..23776)
DNA (1320bp) protein (440aa)
Multidrug resistance protein-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQW9_HALAR
Multidrug resistance protein-like protein {ECO:0000313|EMBL:EMA23616.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
major facilitator superfamily protein
sw_6_scaffold_224_25

Not on your lists

comp(23876..24910)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11959.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_6_scaffold_224_26
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25082..25396
DNA (315bp) protein (105aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca
DNA-directed RNA polymerase subunit n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H920_9EURY
DNA-directed RNA polymerase subunit M homolog
sw_6_scaffold_224_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25490..25792
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
DNA-directed RNA polymerase subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTJ3_NATM8
tfs1; transcription elongation factor TFS
sw_6_scaffold_224_28
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25829..26377
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA21449.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_6_scaffold_224_29
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26370..26717)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EL75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ47858.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_6_scaffold_224_30
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26731..26973)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48213.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
Displaying items 1-30 of 43 in total

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