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sw_6_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_239_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

192..1301
DNA (1110bp) protein (370aa)
PrsW family protein n=2 Tax=Natronomonas pharaonis RepID=Q3ITR5_NATPD
hypothetical protein
PrsW family protein {ECO:0000313|EMBL:CAI48468.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_239_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1635..2339
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPD1_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELZ24257.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sour
DNA-binding protein
sw_6_scaffold_239_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2450..3103
DNA (654bp) protein (218aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK3_HALBP
amino acid/amide ABC transporter substrate-binding protein, haat family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ADQ67055.1}; Amino acid/amide ABC transporter substrate-binding protein, haat family {ECO:0000313|EMBL:ELY2960
sw_6_scaffold_239_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3103..3885
DNA (783bp) protein (261aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24259.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
livG-2; branched-chain amino acid ABC transporter ATP-binding protein
sw_6_scaffold_239_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3882..4619
DNA (738bp) protein (246aa)
ABC transporter-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLV9_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:ELZ24260.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
ABC transporter
sw_6_scaffold_239_6
unknown

Not on your lists

4616..4732
DNA (117bp) protein (39aa)

This feature has no annotations

sw_6_scaffold_239_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4729..5601
DNA (873bp) protein (291aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK7_HALBP
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ADQ67059.1}; Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:ELY29606.1}; TaxID=46
sw_6_scaffold_239_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5641..7140
DNA (1500bp) protein (500aa)
cxp_1; carboxypeptidase (EC:3.4.17.-)
Metal-dependent carboxypeptidase {ECO:0000313|EMBL:CAI48563.1}; EC=3.4.17.- {ECO:0000313|EMBL:CAI48563.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
Metal-dependent carboxypeptidase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITH0_NATPD
sw_6_scaffold_239_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7190..7357)
DNA (168bp) protein (56aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L0_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35993.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_6_scaffold_239_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7451..7654)
DNA (204bp) protein (68aa)
Carboxypeptidase Taq n=1 Tax=Halobacterium sp. DL1 RepID=G4IAT4_9EURY
Carboxypeptidase {ECO:0000313|EMBL:AHG02731.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Zn-dependent carboxypeptidase
sw_6_scaffold_239_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8838..9194)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ30_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90191.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_239_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9570..10436
DNA (867bp) protein (289aa)
thiL; thiamin-phosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000313|EMBL:CAI49231.1}; EC=2.7.4.16 {ECO:0000313|EMBL:CAI49231.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Thiamine-monophosphate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRL2_NATPD
sw_6_scaffold_239_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10433..11608)
DNA (1176bp) protein (392aa)
M50 family metalloprotease {ECO:0000313|EMBL:CAI49230.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI49230.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
Probable metalloprotease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRL3_NATPD
metalloprotease
sw_6_scaffold_239_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11682..11924)
DNA (243bp) protein (81aa)
Uncharacterized protein n=9 Tax=Haloarcula RepID=G0HT46_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56065.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_6_scaffold_239_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12197..13078)
DNA (882bp) protein (294aa)
Molybdopterin synthase catalytic subunit {ECO:0000313|EMBL:CAI49228.1}; EC=2.8.1.12 {ECO:0000313|EMBL:CAI49228.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Molybdopterin synthase catalytic subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRL5_NATPD
moaE; bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE
sw_6_scaffold_239_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13499..13975
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52202.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_239_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14185..15042
DNA (858bp) protein (286aa)
Protein-export membrane protein SecF n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E0_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
secF; preprotein translocase subunit SecF
sw_6_scaffold_239_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15039..16586
DNA (1548bp) protein (516aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4E5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
sw_6_scaffold_239_19
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16675..18048
DNA (1374bp) protein (458aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DK10_9EURY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ELZ35158.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
sub; peptidase S8 and S53 subtilisin kexin sedolisin
sw_6_scaffold_239_20
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18067..18693)
DNA (627bp) protein (209aa)
rnhB; RNAase HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1417673 species="Archaea; Euryarchaeota; H
Ribonuclease HII n=2 Tax=Haloarcula hispanica RepID=G0HTN6_HALHT
sw_6_scaffold_239_21
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18737..19288)
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ20788.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_6_scaffold_239_22
unknown

Not on your lists

comp(19554..19775)
DNA (222bp) protein (74aa)

This feature has no annotations

sw_6_scaffold_239_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19904..21199)
DNA (1296bp) protein (432aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1033806
tRNA pseudouridine 55 synthase archaea n=2 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ18_9EURY
tRNA pseudouridine 55 synthase archaea
sw_6_scaffold_239_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21408..21542
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN30066.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_239_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21543..22289)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13283.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_6_scaffold_239_26
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22387..23358
DNA (972bp) protein (324aa)
Endonuclease nuclease-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L749_HALJP
Endonuclease nuclease-like protein {ECO:0000313|EMBL:EMA28918.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japon
nuc; endonuclease nuclease-like protein
sw_6_scaffold_239_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23355..23816)
DNA (462bp) protein (154aa)
rRNA maturation endonuclease Nob1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMS3_NATPD
hypothetical protein
rRNA maturation endonuclease Nob1 {ECO:0000313|EMBL:CAI50584.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_6_scaffold_239_28
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23816..24052)
DNA (237bp) protein (79aa)
PRC-barrel domain-containing protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGF9_NATGS
hypothetical protein
PRC-barrel domain-containing protein {ECO:0000313|EMBL:ELY62358.1}; Uncharacterized protein {ECO:0000313|EMBL:AFZ72242.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Nat
sw_6_scaffold_239_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24160..24624
DNA (465bp) protein (155aa)
Blue (Type 1) copper domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2W2_HALMD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACV47434.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_6_scaffold_239_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25188..27242
DNA (2055bp) protein (685aa)
UvrABC system protein B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBH3_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
Displaying items 1-30 of 46 in total

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