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sw_6_scaffold_325

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_325_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..214
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24991.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_325_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

319..1668
DNA (1350bp) protein (450aa)
Kynureninase {ECO:0000256|PIRNR:PIRNR038800, ECO:0000313|EMBL:ELZ32820.1}; EC=3.7.1.3 {ECO:0000256|PIRNR:PIRNR038800};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
kynU; kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DBE5_9EURY
sw_6_scaffold_325_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1714..2316
DNA (603bp) protein (201aa)
Transcriptional regulator n=1 Tax=Halogranum salarium B-1 RepID=J3EVW2_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EJN58857.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
AraC family transcriptional regulator
sw_6_scaffold_325_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2491..3225
DNA (735bp) protein (245aa)
3'-5' exonuclease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXY2_9EURY
3'-5' exonuclease {ECO:0000313|EMBL:EMA50173.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 1355
hypothetical protein
sw_6_scaffold_325_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3222..4028
DNA (807bp) protein (269aa)
lplA; lipoate-protein ligase (EC:6.3.4.-)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2J1_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA39921.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameli
sw_6_scaffold_325_6

Not on your lists

comp(4064..4936)
DNA (873bp) protein (291aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=uncultured archaeon A07HR60 RepID=V5A5T4_9ARCH
pstB; phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
sw_6_scaffold_325_7

Not on your lists

comp(4936..6558)
DNA (1623bp) protein (541aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=uncultured archaeon A07HR60 RepID=V4XQY1_9ARCH
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ESS10914.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
pstA2; phosphate ABC transporter permease
sw_6_scaffold_325_8

Not on your lists

comp(6558..7505)
DNA (948bp) protein (316aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y7Q6_9ARCH
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:ESS10913.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
phosphate ABC transporter, inner membrane subunit PstC
sw_6_scaffold_325_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7590..8609)
DNA (1020bp) protein (340aa)
Phosphate ABC transporter substrate-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTK4_HALVA
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA11304.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
pstS1; ABC-type transport system periplasmic substrate-binding protein (probable substrate phosphate)
sw_6_scaffold_325_10
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8763..9212
DNA (450bp) protein (150aa)
Peroxiredoxin n=1 Tax=Halonotius sp. J07HN4 RepID=U1QHR8_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ERH06388.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
bcp2; bacterioferritin comigratory protein
sw_6_scaffold_325_11
unknown

Not on your lists

9258..9350
DNA (93bp) protein (31aa)

This feature has no annotations

sw_6_scaffold_325_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9377..9769)
DNA (393bp) protein (131aa)
Pectin degradation protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDL5_9EURY
Pectin degradation protein {ECO:0000313|EMBL:ELY59814.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus
cupin domain-containing protein
sw_6_scaffold_325_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9773..10219)
DNA (447bp) protein (149aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCP5_9EURY
ABC transporter {ECO:0000313|EMBL:EMA54864.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
comA; competence-like protein
sw_6_scaffold_325_14
unknown

Not on your lists

10248..10568
DNA (321bp) protein (107aa)

This feature has no annotations

sw_6_scaffold_325_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10658..11359
DNA (702bp) protein (234aa)
Putative NAD(P)H nitroreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN99_9EURY
Putative NAD(P)H nitroreductase {ECO:0000313|EMBL:EFW93894.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
NAD(P)H nitroreductase
sw_6_scaffold_325_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11455..12024
DNA (570bp) protein (190aa)
Carboxymuconolactone decarboxylase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VNY6_HALJB
Carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ELY38692.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoc
sw_6_scaffold_325_17
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12846..13295)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E4Z4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ41449.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_6_scaffold_325_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13787..14461
DNA (675bp) protein (225aa)
Ribonuclease H n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0W5_HALMD
ribonuclease H
Ribonuclease H {ECO:0000313|EMBL:ACV48980.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain A
sw_6_scaffold_325_19
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14614..15627
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JRP0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA11033.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_6_scaffold_325_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15639..16979)
DNA (1341bp) protein (447aa)
glpC; glycerol-3-phosphate dehydrogenase subunit C (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:CCQ37759.1}; EC=1.1.5.3 {ECO:0000313|EMBL:CCQ37759.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Glycerol-3-phosphate dehydrogenase subunit C n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLI1_NATM8
sw_6_scaffold_325_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16976..18250)
DNA (1275bp) protein (425aa)
glpB; glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B {ECO:0000313|EMBL:ESP90080.1}; EC=1.1.5.3 {ECO:0000313|EMBL:ESP90080.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Anaerobic glycerol-3-phosphate dehydrogenase subunit B n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HH55_9EURY
sw_6_scaffold_325_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18240..19865)
DNA (1626bp) protein (542aa)
glpA1; glycerol-3-phosphate dehydrogenase subunit A (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
Glycerol-3-phosphate dehydrogenase subunit A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5C2_NATM8
sw_6_scaffold_325_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20161..21693
DNA (1533bp) protein (511aa)
glpK1; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP
Glycerol kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTK0_NATM8
sw_6_scaffold_325_24
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21836..22933
DNA (1098bp) protein (366aa)
Peptide chain release factor 1 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R990_HALMT
erf1; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000313|EMBL:AFK20800.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (st
sw_6_scaffold_325_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22958..25600)
DNA (2643bp) protein (881aa)
DNA mismatch repair protein MutS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU23_NATPD
mutS_1; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CAI48360.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phar
sw_6_scaffold_325_26
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25798..27141
DNA (1344bp) protein (448aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase (Acetylating) {ECO:0000313|EMBL:AEH37075.1}; EC=1.2.1.10 {ECO:0000313|EMBL:AEH37075.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbac
Acetaldehyde dehydrogenase (Acetylating) n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBG0_HALXS
sw_6_scaffold_325_27
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27175..28377
DNA (1203bp) protein (401aa)
Alcohol dehydrogenase, class IV n=1 Tax=Natronococcus occultus SP4 RepID=L0K3I9_9EURY
alcohol dehydrogenase, class IV
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:AGB38909.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus
sw_6_scaffold_325_28
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28597..30246
DNA (1650bp) protein (550aa)
Thiamine pyrophosphate domain-containing TPP-binding protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M5Q5_9EURY
Thiamine pyrophosphate domain-containing TPP-binding protein {ECO:0000313|EMBL:EMA41011.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sou
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
sw_6_scaffold_325_29

Not on your lists

comp(30250..31017)
DNA (768bp) protein (256aa)
dehydrogenase/reductase 4 (EC:1.1.1.-)
Dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V5AAS5_9ARCH
Dehydrogenase {ECO:0000313|EMBL:ESS12810.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_6_scaffold_325_30
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31096..31302
DNA (207bp) protein (69aa)
bcp1; peroxiredoxin (EC:1.11.1.-)
Peroxiredoxin n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ23_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EFW93087.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
Displaying 30 items

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