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sw_6_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_56_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKP7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36282.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_56_2
unknown

Not on your lists

437..784
DNA (348bp) protein (116aa)

This feature has no annotations

sw_6_scaffold_56_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(788..1468)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIW8_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
phosphate uptake regulator PhoU
sw_6_scaffold_56_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1752..2747
DNA (996bp) protein (332aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS11_NATPD
abc14r_1; ABC transporter
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI49079.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_6_scaffold_56_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2786..3163)
DNA (378bp) protein (126aa)
30S ribosomal protein S8e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN16_NATPD
rps8R; 30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_6_scaffold_56_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3266..4180
DNA (915bp) protein (305aa)
cation transporter n=1 Tax=Halomicrobium katesii RepID=UPI00038014A9
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ELZ28150.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
cation diffusion facilitator family transporter
sw_6_scaffold_56_7
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4199..4852)
DNA (654bp) protein (218aa)
Putative acetamidase/formamidase n=1 Tax=Natronococcus occultus SP4 RepID=L0JUX0_9EURY
putative acetamidase/formamidase
Putative acetamidase/formamidase {ECO:0000313|EMBL:AGB35899.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus
sw_6_scaffold_56_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4980..5153)
DNA (174bp) protein (58aa)
Formamidase {ECO:0000313|EMBL:ELY59530.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
sw_6_scaffold_56_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5202..6119)
DNA (918bp) protein (306aa)
formamidase (EC:3.5.1.49)
Formamidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ34_9EURY
Formamidase {ECO:0000313|EMBL:EFW90195.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
sw_6_scaffold_56_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6535..7428)
DNA (894bp) protein (298aa)
beta-aspartyl-peptidase (EC:3.4.19.5)
Peptidase T2 asparaginase 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R007_9EURY
Peptidase T2 asparaginase 2 {ECO:0000313|EMBL:EFW89901.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalo
sw_6_scaffold_56_11
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7590..8069
DNA (480bp) protein (160aa)
RNA-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GXF5_9EURY
RNA-binding protein {ECO:0000313|EMBL:ELZ75514.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
PUA domain-containing protein
sw_6_scaffold_56_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8081..9166)
DNA (1086bp) protein (362aa)
Homolog to aminomethyltransferase (Homolog to glycine cleavage system protein T) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y560_NATM8
gcvT; homolog to aminomethyltransferase (homolog to glycine cleavage system protein T)
Homolog to glycine cleavage system protein T {ECO:0000313|EMBL:CCQ37687.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natro
sw_6_scaffold_56_13
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9269..9472)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=L9YGA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY90708.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
sw_6_scaffold_56_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9530..9823)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZFL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_56_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10088..10921
DNA (834bp) protein (278aa)
Sugar-specific transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KYI1_HALAR
trmB2; sugar-specific transcriptional regulator
Sugar-specific transcriptional regulator {ECO:0000313|EMBL:EMA29545.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_6_scaffold_56_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10923..11858)
DNA (936bp) protein (312aa)
Succinoglycan biosynthesis protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7N9_HALJP
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:EMA10200.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallis
glycosyl transferase family A
sw_6_scaffold_56_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12017..14953
DNA (2937bp) protein (979aa)
Transmembrane oligosaccharyl transferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ08_9EURY
Transmembrane oligosaccharyl transferase {ECO:0000313|EMBL:EMA44719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transmembrane oligosaccharyl transferase
sw_6_scaffold_56_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14955..15917
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MH96_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43805.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
DUF368 family protein
sw_6_scaffold_56_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15957..16460
DNA (504bp) protein (168aa)
Isoleucine cluster protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4A5_9EURY
Isoleucine cluster protein {ECO:0000313|EMBL:EMA39210.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
homolog to ferripyochelin-binding protein
sw_6_scaffold_56_20
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16511..16939
DNA (429bp) protein (143aa)
UpsA domain-containing protein n=2 Tax=Haloferax RepID=M0ILS8_9EURY
UpsA domain-containing protein {ECO:0000313|EMBL:ELZ96414.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
hypothetical protein
sw_6_scaffold_56_21
unknown

Not on your lists

comp(17001..17231)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_6_scaffold_56_22
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17298..17477)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000366B0AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ47489.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
sw_6_scaffold_56_23
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17553..18131
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K4J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15039.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_6_scaffold_56_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18098..18619)
DNA (522bp) protein (174aa)
Acetyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LC04_HALJP
Acetyltransferase {ECO:0000313|EMBL:EMA29964.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
hat7; acetyltransferase
sw_6_scaffold_56_25
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18693..19268
DNA (576bp) protein (192aa)
2-heptaprenyl-1,4-naphthoquinone methyltransferase n=2 Tax=Halarchaeum acidiphilum RepID=U3AFP0_9EURY
2-heptaprenyl-1,4-naphthoquinone methyltransferase {ECO:0000313|EMBL:GAD53603.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum
methyltransferase
sw_6_scaffold_56_26
unknown

Not on your lists

19376..19513
DNA (138bp) protein (46aa)

This feature has no annotations

sw_6_scaffold_56_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19510..19965)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59899.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_6_scaffold_56_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20094..21602
DNA (1509bp) protein (503aa)
TraB family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR02_NATPD
hypothetical protein
TraB family protein {ECO:0000313|EMBL:CAI49442.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_56_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21599..22225
DNA (627bp) protein (209aa)
metalloprotease (EC:3.4.24.-)
M50 family metalloprotease {ECO:0000313|EMBL:CAI49443.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI49443.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
M50 family metalloprotease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR01_NATPD
sw_6_scaffold_56_30
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22282..23259
DNA (978bp) protein (326aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halogranum salarium B-1 RepID=J3EZW1_9EURY
Displaying items 1-30 of 41 in total

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