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sw_6_scaffold_89

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_89_1
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..788
DNA (786bp) protein (262aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=2 Tax=Haloferax RepID=M0GUS7_HALL2
mandelate racemase/muconate lactonizing enzyme family protein
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:ELZ74604.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
sw_6_scaffold_89_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

785..1738
DNA (954bp) protein (318aa)
pfk1; phosphofructokinase (EC:2.7.1.11)
PfkB domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU02_9EURY
PfkB domain protein {ECO:0000313|EMBL:EFW92081.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
sw_6_scaffold_89_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1791..2744
DNA (954bp) protein (318aa)
PfkB domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSN9_9EURY
PfkB domain protein {ECO:0000313|EMBL:EFW92448.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
PfkB domain-containing protein
sw_6_scaffold_89_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2745..3833)
DNA (1089bp) protein (363aa)
Peptidase M24 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WZV1_9EURY
Peptidase M24 {ECO:0000313|EMBL:ELY53898.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
hypothetical protein
sw_6_scaffold_89_5
uncultured haloarchaeon FLAS10H9, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3967..5319
DNA (1353bp) protein (451aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=uncultured haloarchaeon FLAS10H9 RepID=A7U0W5_9EURY
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:ABT17396.1}; TaxID=447098 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="
sw_6_scaffold_89_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5333..7081
DNA (1749bp) protein (583aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKB2_9EURY
pyruvate kinase
sw_6_scaffold_89_7
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7652..7852)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WIZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY48318.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_6_scaffold_89_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7854..9041)
DNA (1188bp) protein (396aa)
Carbohydrate ABC transporter ATP-binding protein, cut1 family n=1 Tax=Halogranum salarium B-1 RepID=J3JFB4_9EURY
Carbohydrate ABC transporter ATP-binding protein, cut1 family {ECO:0000313|EMBL:EJN59104.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halog
carbohydrate ABC transporter ATP-binding protein, cut1 family
sw_6_scaffold_89_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9046..9984)
DNA (939bp) protein (313aa)
ABC-type sugar transport system, permease component n=2 Tax=Haloquadratum RepID=U1NNE5_9EURY
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERG91762.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="
malFG-4; sugar ABC transporter permease
sw_6_scaffold_89_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9981..10994)
DNA (1014bp) protein (338aa)
ABC-type sugar transport system, permease component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PHX1_9EURY
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERG91761.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="
tsgB3; sugar ABC transporter permease
sw_6_scaffold_89_11
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11022..12545)
DNA (1524bp) protein (508aa)
Sugar ABC transporter substrate binding protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R826_HALMT
rbsB-2; sugar ABC transporter substrate binding protein
Sugar ABC transporter substrate binding protein {ECO:0000313|EMBL:AFK20386.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
sw_6_scaffold_89_12
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12636..13742)
DNA (1107bp) protein (369aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT88_HALLT
transcriptional regulator, TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACM58060.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_6_scaffold_89_13
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13781..14767)
DNA (987bp) protein (329aa)
Oxidoreductase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HP86_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ86326.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
oxidoreductase
sw_6_scaffold_89_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14910..15650
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS2_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48374.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_89_15
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15706..16674
DNA (969bp) protein (323aa)
nagC; glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GTL7_9EURY
Glucokinase {ECO:0000313|EMBL:ELZ75530.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_6_scaffold_89_16

Not on your lists

comp(16748..17197)
DNA (450bp) protein (150aa)
UspA domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKE2_9ARCH
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN04739.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_89_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17336..18751
DNA (1416bp) protein (472aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1210908 species="Archaea; Eurya
fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Halogranum salarium B-1 RepID=J3EVX2_9EURY
sw_6_scaffold_89_18
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18940..19809)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UXA7_HALMA
Uncharacterized protein {ECO:0000313|EMBL:AAV48096.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
hypothetical protein
sw_6_scaffold_89_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19818..21674
DNA (1857bp) protein (619aa)
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=469382
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NT14_HALBP
sw_6_scaffold_89_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21671..22405)
DNA (735bp) protein (245aa)
tRNA (Cytidine/uridine-2'-O-)-methyltransferase {ECO:0000313|EMBL:CAI49977.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI49977.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
RNA methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW34_9EURY
tRNA/rRNA methyltransferase
sw_6_scaffold_89_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22402..22806)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYG7_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01108.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
Displaying 21 items

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