ggKbase home page

sw_6_scaffold_283_3

Organism: SW_6_Halobacteriales_68_112

partial RP 28 / 55 MC: 3 BSCG 23 / 51 MC: 1 ASCG 28 / 38
Location: comp(1336..3279)

Top 3 Functional Annotations

Value Algorithm Source
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 490.0
  • Bit_score: 687
  • Evalue 3.20e-195
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 490.0
  • Bit_score: 687
  • Evalue 1.60e-194
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 490.0
  • Bit_score: 687
  • Evalue 1.10e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1944
ATGACTGACGCCAGCGACGACGTGCGCGCGCTGGTCGAGGACACCGACCTTCCCAAGCGCCTCCGCGAGAAGGTGTACGAGGCCGTCGACGACCGAGGGGCGACGCTCGACGAGGTCGAAGACATCGTCTCGGCGGTCGAGTCGCGGTATCGGGACACCCGCGTCGACCCGCTGGACCCCGTCGGCACCGTCTCCGCGCAGTCCATCGGTGAGCCGGGGACGCAGATGTCGATCCCGGCCGACGAGCGTGTTCTCGTCCGGCGGGACGGCGAGACGGACGCCGTCGAGATCGGCCCGTTCGTCGACTCGCTGATGGAATCCGCCGAGACACGCGCGTTCGACGACCACGAGATCGCGCTCGCGCCCGACGGTATCGAGGTGCCGAGTCTCGGTGCTGACGAACGGGTTCGCTGGAAGGCGCTCGAAGAAGTCAGCCGCCACGAGACCCCCGACGAGCTGCTCCGGTTCGAGCTCGAATCCGGGCGGACGATTCGGGCGACGAAGGCCCATTCGTTCGTGACGCGGCGGGACAACGACGTAGTCCCCGTCGCGGGCGAGGAACTGAGCGAGGGGGACTGGCTCCCGGTCGTCGGTGACCTGCCCGTTGAGTCGGGTAGCGACACCGTTGACCTGCGGGAGCACCTCCCCGCGAGCGATTACTGGTACACGTCCGCGCTGACCGACGGTGGCGCGGCGACGTTCCCGGCTGGCGACGAGCAGGTCGAGAACAAGCGGGCCGCGCTCGAAGCGGGACGAATCGACGGCGGGGCCGTCTATCCGAGGGGTGGAACCGTCGGGCTTCCCGAGCGGCTCCCGCTCGACGAGGAGACTGGATTCTTCATCGGCGCGTGGCTCGCCGAGGGCAACGCGACGGACGGTTACGTCTCCGTTTCGAACACCGACCCGGCGTTCCAAGAGCGGGTTCGCTCGTTCGCCGAGCGATTCGATCTCTCCGTGAACGAGTACGCCAGCGACGGCGAATACGGCGACAGCTACGATATTCGGGTGAACGGGACGGTACTCGCCGACTTCCTTCGGACAGCATGTCTCGACGACGGCGAGAAGGTCGTTCCTGGATTCGCGTTCGGGGCCGACGAGTCGTTCGTGGCCGGGCTGCTCGCCGGCTACTTCGGCGGTGACGGAAACGTCGGTCGAAGCAGTATTCGGGCGAGTTCGACGAGCGAGCGGCTGACCGCCGGGGTCGCGCTCCTGCTCGCACGAGTCAACGTCTACGCCACCCTCGGCGAGACGGACGGCTCCCGAACGCTCCGTATCCCCGCGAAGTTCGTCCCCCGGTTCGCCGCGCGGGTCGGGATGGTCGGCGAGCGTGGCGACGCACTCGCGGCACTCGCCGACGATGTCGACGCTGACGGCCCGGACGCGACCGATCAGATTCCGAACTTCGGCGACGCGCTCCGGACTGCGGTCGAGGGTGATGTCGTCTGGGACCGAATCGACTCGGTCGAGACGGTCAGCAGCGACTACGAGTACGTGTACGACTTCTCCGTCACGGGGCTGGAGACGTTCACCACCGCGGAGGGCGTCGTGACGCACAACACGATGAACACCTTCCACTACGCGGGCGTCGCAGAGATCGACGTGACGCAGGGGCTGCCGCGGCTCATCGAACTCGTGGACGCGCGCAAGACGCCGGACACGCCGATGATGACCGTCTATCTCGACGAGGAGCACGCGAGCGACCGCGAGCGCGCCCACGAGGTCGTCTGGAACATCGAGTCGACGCAGATACTCGCGTTGGGCGACGTGTCGACGAACGTCGCCGACATGCTCGTCCGTATCGACCTCAACGAGGAGACGCTACGCGAGCGGTGGCCCACCTACGACGACGTCGACGAGATCGTCGCGGAGATCGCTGCGCGACATCGTGTTCAAGGGGATCGAGGACATCACGCGCGTCGTCATCCGGAAGGAGGAGCTCGATGA
PROTEIN sequence
Length: 648
MTDASDDVRALVEDTDLPKRLREKVYEAVDDRGATLDEVEDIVSAVESRYRDTRVDPLDPVGTVSAQSIGEPGTQMSIPADERVLVRRDGETDAVEIGPFVDSLMESAETRAFDDHEIALAPDGIEVPSLGADERVRWKALEEVSRHETPDELLRFELESGRTIRATKAHSFVTRRDNDVVPVAGEELSEGDWLPVVGDLPVESGSDTVDLREHLPASDYWYTSALTDGGAATFPAGDEQVENKRAALEAGRIDGGAVYPRGGTVGLPERLPLDEETGFFIGAWLAEGNATDGYVSVSNTDPAFQERVRSFAERFDLSVNEYASDGEYGDSYDIRVNGTVLADFLRTACLDDGEKVVPGFAFGADESFVAGLLAGYFGGDGNVGRSSIRASSTSERLTAGVALLLARVNVYATLGETDGSRTLRIPAKFVPRFAARVGMVGERGDALAALADDVDADGPDATDQIPNFGDALRTAVEGDVVWDRIDSVETVSSDYEYVYDFSVTGLETFTTAEGVVTHNTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVYLDEEHASDRERAHEVVWNIESTQILALGDVSTNVADMLVRIDLNEETLRERWPTYDDVDEIVAEIAARHRVQGDRGHHARRHPEGGAR*