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sw_6_scaffold_283

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_283_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..813)
DNA (813bp) protein (271aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
transcription elongation factor NusA-like protein
sw_6_scaffold_283_2
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(855..1394)
DNA (540bp) protein (180aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Nat
DNA-directed RNA polymerase subunit A'' n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MB69_9EURY
DNA-directed RNA polymerase, subunit A''
sw_6_scaffold_283_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1336..3279)
DNA (1944bp) protein (648aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_6_scaffold_283_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3272..3937)
DNA (666bp) protein (222aa)
rpoA1; DNA-directed RNA polymerase subunit A' (subunit A) (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5V8_NATM8
sw_6_scaffold_283_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4012..6144)
DNA (2133bp) protein (711aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=2 Tax=Haloarcula RepID=M0K2W8_9EURY
DNA-directed RNA polymerase subunit A'
sw_6_scaffold_283_6
Halobacteriaceae archaeon YC89, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6238..8067)
DNA (1830bp) protein (610aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1126241 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halorientalis regularis RepID=U3MZG6_9EURY
sw_6_scaffold_283_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8069..9631)
DNA (1563bp) protein (521aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN4_NATPD
sw_6_scaffold_283_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9632..9859)
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1};; TaxID=358396 species="
DNA-directed RNA polymerase subunit H n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LI08_9EURY
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
sw_6_scaffold_283_trna_1
unknown

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10096..10168
DNA (73bp)
transferRNA
sw_6_scaffold_283_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10542..11111
DNA (570bp) protein (190aa)
Receiver box response regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSK8_NATM8
receiver box response regulator
Receiver box response regulator {ECO:0000313|EMBL:CCQ37360.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
sw_6_scaffold_283_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11149..12177)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IWP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87607.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_6_scaffold_283_11
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12252..12692
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NUP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ48032.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
sw_6_scaffold_283_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12682..14202)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_283_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14251..14520)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D567_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29314.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_6_scaffold_283_14

Not on your lists

comp(14541..14912)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XW38_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06428.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_6_scaffold_283_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14947..15534)
DNA (588bp) protein (196aa)
protein-L-isoaspartate(D-aspartate)O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase {ECO:0000313|EMBL:ACV46657.1}; EC=2.1.1.77 {ECO:0000313|EMBL:ACV46657.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacte
protein-L-isoaspartate O-methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000371585A
sw_6_scaffold_283_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15642..16679)
DNA (1038bp) protein (346aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_6_scaffold_283_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16798..17445)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN29_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35300.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_283_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17537..18415)
DNA (879bp) protein (293aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protease HtpX homolog n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JL17_HALVA
heat shock protein HtpX
sw_6_scaffold_283_19

Not on your lists

comp(18564..19919)
DNA (1356bp) protein (452aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YI85_9ARCH
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein {ECO:0000313|EMBL:ESS11062.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archae
peptide ABC transporter ATPase
sw_6_scaffold_283_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19912..20949)
DNA (1038bp) protein (346aa)
Peptide ABC transporter ATPase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIF3_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA45487.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
dppD; ABC-type transport system ATP-binding protein (probable substrate dipeptide/oligopeptide/nickel)
sw_6_scaffold_283_21
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20952..22148)
DNA (1197bp) protein (399aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PNB9_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERH11644.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halop
binding-protein-dependent transporters inner membrane component
sw_6_scaffold_283_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22148..23122)
DNA (975bp) protein (325aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM26_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA45485.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
sw_6_scaffold_283_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23150..25018)
DNA (1869bp) protein (623aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTZ7_9EURY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ26725.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
extracellular solute-binding protein, family 5
sw_6_scaffold_283_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25223..26332
DNA (1110bp) protein (370aa)
NMD3 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISW5_NATPD
hypothetical protein
NMD3 family protein {ECO:0000313|EMBL:CAI48770.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_283_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26325..27332
DNA (1008bp) protein (336aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JHT0_HALVA
methyltransferase
sw_6_scaffold_283_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27356..28552
DNA (1197bp) protein (399aa)
Amidohydrolase, imidazolonepropionase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCP4_9EURY
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:ESP87798.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
amidohydrolase, imidazolonepropionase
sw_6_scaffold_283_27
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28613..29527
DNA (915bp) protein (305aa)
Malate dehydrogenase {ECO:0000313|EMBL:ESP89544.1}; EC=1.1.1.37 {ECO:0000313|EMBL:ESP89544.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidat
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNP2_9EURY
Displaying 28 items

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